RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LAMB3Q13751 1172 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 KRT33BQ14525 404 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 SPA17Q15506 151 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 GPR19Q15760 415 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 ANKRD20A2Q5SQ80 823 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 ANKRD20A1Q5TYW2 823 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 ANKRD20A3Q5VUR7 823 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 CAPRIN2Q6IMN6 1127 aaKnown RBP14.5□□□□□ -0.09
MSH5-208ENST00000429846 FAM199XQ6PEV8 388 aaPredicted RBP14.5□□□□□ -0.09
MSH5-208ENST00000429846 CERS6Q6ZMG9 384 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 SNX20Q7Z614 316 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 NXPE1Q8N323 547 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 TC2NQ8N9U0 490 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 CPT1BQ92523 772 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 KRT35Q92764 455 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 COPS8Q99627 209 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 HEMGNQ9BXL5 484 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 POMT2Q9UKY4 750 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 PLAAQ9Y263 795 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 FARSAQ9Y285 508 aaKnown RBP14.5□□□□□ -0.09
MSH5-208ENST00000429846 PCDHA13Q9Y5I0 950 aa14.5□□□□□ -0.09
MSH5-208ENST00000429846 K7EM74 188 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 SGTAO43765 313 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 RAB40ALP0C0E4 278 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 RBP3P10745 1247 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 ATP1B2P14415 290 aaPredicted RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 CDH3P22223 829 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 PSMB4P28070 264 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 CYLC1P35663 651 aaPredicted RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 ZNF140P52738 457 aaPredicted RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 RPS18P62269 152 aaKnown RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 GPS2Q13227 327 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 MSLNQ13421 630 aaPredicted RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 GPR33Q49SQ1 333 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 RNF214Q8ND24 703 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 OR13C4Q8NGS5 318 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 MR1Q95460 341 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 SPATA13Q96N96 652 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 RUFY1Q96T51 708 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 APOL2Q9BQE5 337 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 AKIRIN1Q9H9L7 192 aaPredicted RBP14.49□□□□□ -0.09
MSH5-208ENST00000429846 ARNT2Q9HBZ2 717 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 ACSS2Q9NR19 701 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 FAM8A1Q9UBU6 413 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 PCDHA3Q9Y5H8 950 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 PIKFYVEQ9Y2I7 2098 aa14.49□□□□□ -0.09
MSH5-208ENST00000429846 IGLV3-16A0A075B6K0 115 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 IFRD1O00458 451 aaPredicted RBP14.48□□□□□ -0.09
MSH5-208ENST00000429846 KCNN4O15554 427 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 MAP3K7O43318 606 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 DNAJB5O75953 348 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 POLBP06746 335 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 GSTM1P09488 218 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 GP1BBP13224 206 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 POLR2CP19387 275 aaPredicted RBP14.48□□□□□ -0.09
MSH5-208ENST00000429846 CETN2P41208 172 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 CD151P48509 253 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 PGDP52209 483 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 EIF3EP60228 445 aaKnown RBP14.48□□□□□ -0.09
MSH5-208ENST00000429846 GSTM4Q03013 218 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 IL10RAQ13651 578 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 PAPD7Q5XG87 772 aaKnown RBP14.48□□□□□ -0.09
MSH5-208ENST00000429846 ZNF449Q6P9G9 518 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 SARM1Q6SZW1 724 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 CFAP206Q8IYR0 622 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 DSELQ8IZU8 1212 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 OR4E2Q8NGC2 313 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 LCN9Q8WX39 176 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 TBL1YQ9BQ87 522 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 SLC25A23Q9BV35 468 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 TLR10Q9BXR5 811 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 TRIM55Q9BYV6 548 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 OSBPL8Q9BZF1 889 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 ING2Q9H160 280 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 SRMSQ9H3Y6 488 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 C10orf88Q9H8K7 445 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 COG4Q9H9E3 785 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 MLXIPLQ9NP71 852 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 SNX7Q9UNH6 387 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 PCDHGB7Q9Y5F8 929 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 RELNP78509 3460 aa14.48□□□□□ -0.09
MSH5-208ENST00000429846 TNRC6AQ8NDV7 1962 aaKnown RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 USP9YO00507 2555 aaPredicted RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 COL12A1Q99715 3063 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 GSAPA4D1B5 854 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 H7C0S8 307 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 MEN1O00255 615 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 TJP3O95049 919 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 PDGFAP04085 211 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 MLLT10P55197 1068 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 ABRQ12979 859 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 RPA4Q13156 261 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 DARS2Q6PI48 645 aaKnown RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 KLHDC8BQ8IXV7 354 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 LILRA3Q8N6C8 439 aaPredicted RBP14.47□□□□□ -0.09
MSH5-208ENST00000429846 EFCAB3Q8N7B9 438 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 SLC38A9Q8NBW4 561 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 ADAMTS17Q8TE56 1095 aa14.47□□□□□ -0.09
MSH5-208ENST00000429846 NAT14Q8WUY8 206 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms