RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 FFAR3O14843 346 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 GPR42O15529 346 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 ZBTB7AO95365 584 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 SERPINA1P01009 418 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 KRT6AP02538 564 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 KRT6BP04259 564 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 HAPLN1P10915 354 aaPredicted RBP10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 KRT6CP48668 564 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 UBXN11Q5T124 520 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 STK40Q8N2I9 435 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 LPCAT1Q8NF37 534 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 CNIH3Q8TBE1 160 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 FUBP1Q96AE4 644 aaKnown RBP10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 IPPKQ9H8X2 491 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 REEP1Q9H902 201 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 CPNE5Q9HCH3 593 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 LATS2Q9NRM7 1088 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 ANKMY1Q9P2S6 941 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 OPTCQ9UBM4 332 aa10.6□□□□□ -0.71
ATP2C1-204ENST00000428331 SLC12A8A0AV02 714 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 MGEA5O60502 916 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CREG1O75629 220 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CNPP09543 421 aaKnown RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 SOX6P35712 828 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 DCTP40126 519 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CDK5R2Q13319 367 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 BTG3Q14201 252 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 KCNJ8Q15842 424 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ZNF792Q3KQV3 632 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TMEM236Q5W0B7 351 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ABI1Q8IZP0 508 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 KBTBD8Q8NFY9 601 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TMEM40Q8WWA1 233 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 LGALS12Q96DT0 336 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 C1orf74Q96LT6 269 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 YIPF2Q9BWQ6 316 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ADGRE3Q9BY15 652 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 REXO4Q9GZR2 422 aaKnown RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CLPBQ9H078 707 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CSNK1G1Q9HCP0 422 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 COL4A5P29400 1685 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 HOXC13P31276 330 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CPT1AP50416 773 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TUBA1BP68363 451 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 CSTF3Q12996 717 aaKnown RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 DEPDC1Q5TB30 811 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 FAM219BQ5XKK7 198 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TUBA1AQ71U36 451 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 RIMKLAQ8IXN7 391 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TTC29Q8NA56 475 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 BTN2A3PQ96KV6 586 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 PDGFDQ9GZP0 370 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 DCSTAMPQ9H295 470 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 KRT84Q9NSB2 600 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 SAMHD1Q9Y3Z3 626 aaKnown RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 ANK1P16157 1881 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 PDZK1P1A8MUH7 402 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 AIREO43918 545 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 TSPAN3O60637 253 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 MFN2O95140 757 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 GABARAPO95166 117 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 RYKP34925 604 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 HIST2H2ACQ16777 129 aaPredicted RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 SIDT2Q8NBJ9 832 aaKnown RBP10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 OR6Q1Q8NGQ2 317 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 EHD1Q9H4M9 534 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 NTN4Q9HB63 628 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 RASSF1Q9NS23 344 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 C1orf109Q9NX04 203 aa10.59□□□□□ -0.71
ATP2C1-204ENST00000428331 UNCXA6NJT0 531 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 F5H5T6 163 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 NIPSNAP2O75323 286 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 RPS3AP61247 264 aaKnown RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 AQP6Q13520 282 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 GTF2H2Q13888 395 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 NFE2Q16621 373 aaPredicted RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 GTF2H2CQ6P1K8 395 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 DLK2Q6UY11 383 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 AHSA2Q719I0 299 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 GPC2Q8N158 579 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 SKA2Q8WVK7 121 aaPredicted RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 GPR63Q9BZJ6 419 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 MMP27Q9H306 513 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 TRIT1Q9H3H1 467 aaKnown RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 POLE4Q9NR33 117 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 RPS6KA6Q9UK32 745 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 INTS6Q9UL03 887 aaKnown RBP10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 TLR6Q9Y2C9 796 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 TCF3P15923 654 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 MC4RP32245 332 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 DMPKQ09013 629 aa10.58□□□□□ -0.72
ATP2C1-204ENST00000428331 CLCA4Q14CN2 919 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms