RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZNF658BQ4V348 819 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 ATP1A1-AS1Q5TC04 95 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 ARMC6Q6NXE6 501 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 BORAQ6PGQ7 559 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 FBXO38Q6PIJ6 1188 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 C6orf15Q6UXA7 325 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 PPP1R21Q6ZMI0 780 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 GLIS1Q8NBF1 620 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 STARD8Q92502 1023 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 STAMBPL1Q96FJ0 436 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 PPM1MQ96MI6 270 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 NRTNQ99748 197 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 FRMD8P1Q9BZ68 369 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 SMARCAL1Q9NZC9 954 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 SEMA5BQ9P283 1151 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 HEBP2Q9Y5Z4 205 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 COLEC10Q9Y6Z7 277 aa17.93■□□□□ 0.46
PSPC1-202ENST00000427943 SNRNP200O75643 2136 aaKnown RBP17.93■□□□□ 0.46
PSPC1-202ENST00000427943 SPTBP11277 2137 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 C17orf113A0A1B0GUU1 675 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 CCDC162PA2VCL2 907 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 PYCARD-AS1I3L0S3 204 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 POLR2CP19387 275 aaPredicted RBP17.92■□□□□ 0.46
PSPC1-202ENST00000427943 F8A1P23610 371 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 NDUFS1P28331 727 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 OAS2P29728 719 aaKnown RBP17.92■□□□□ 0.46
PSPC1-202ENST00000427943 FOXN2P32314 431 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 DLSTP36957 453 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 FDFT1P37268 417 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 ARL4DP49703 201 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 KPNA2P52292 529 aaKnown RBP17.92■□□□□ 0.46
PSPC1-202ENST00000427943 RPS6KA1Q15418 735 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 OR4E2Q8NGC2 313 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 ZFPM2Q8WW38 1151 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 FERD3LQ96RJ6 166 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 CD180Q99467 661 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 EFHD1Q9BUP0 239 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 OR52A5Q9H2C5 316 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 VPS37BQ9H9H4 285 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 PDE7BQ9NP56 450 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 RAB6BQ9NRW1 208 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 SLC2A6Q9UGQ3 507 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 CROTQ9UKG9 612 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 RARRES3Q9UL19 164 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 PRSS21Q9Y6M0 314 aa17.92■□□□□ 0.46
PSPC1-202ENST00000427943 TLN1Q9Y490 2541 aaKnown RBP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 ERI2A8K979 691 aaKnown RBP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 IFRD1O00458 451 aaPredicted RBP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 ZIC2O95409 532 aaPredicted RBP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 GAS8O95995 478 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 ZSCAN5DPP0CG00 497 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 ITGB6P18564 788 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 SIX1Q15475 284 aaPredicted RBP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 SKIDA1Q1XH10 827 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.91■□□□□ 0.46
PSPC1-202ENST00000427943 PWWP2BQ6NUJ5 590 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 C16orf46Q6P387 395 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 CYB5D1Q6P9G0 228 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 PRICKLE2Q7Z3G6 844 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 KMT5CQ86Y97 462 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 CCDC89Q8N998 374 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 PHC3Q8NDX5 983 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 ACVR1CQ8NER5 493 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 OR13J1Q8NGT2 312 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 HGH1Q9BTY7 390 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 FGF21Q9NSA1 209 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 SOHLH2Q9NX45 425 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 TENM4Q6N022 2769 aa17.91■□□□□ 0.46
PSPC1-202ENST00000427943 HEATR9A2RTY3 570 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 GSAPA4D1B5 854 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 GOLGA6L3A6NEY3 463 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 SLC28A2O43868 658 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 SUN1O94901 812 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 CCDC175P0C221 793 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 PSMA3P25788 255 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 NSG1P42857 185 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 POLE2P56282 527 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 HSD11B2P80365 405 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 ACY1Q03154 408 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 PRKAA1Q13131 559 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 SEMA5AQ13591 1074 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 BRD3Q15059 726 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 GPR19Q15760 415 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 TSTD2Q5T7W7 516 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 NAPRTQ6XQN6 538 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 LCN9Q8WX39 176 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 HDAC10Q969S8 669 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 ZNF778Q96MU6 729 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 CATSPER2Q96P56 530 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 FAM117AQ9C073 453 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 STARD5Q9NSY2 213 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 POMT2Q9UKY4 750 aa17.9■□□□□ 0.46
PSPC1-202ENST00000427943 HEMK1Q9Y5R4 338 aaPredicted RBP17.9■□□□□ 0.46
PSPC1-202ENST00000427943 J3QKU1 62 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 BTN3A1O00481 513 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 KATNA1O75449 491 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 AP2A2O94973 939 aa17.89■□□□□ 0.45
PSPC1-202ENST00000427943 ZBTB11O95625 1053 aaPredicted RBP17.89■□□□□ 0.45
PSPC1-202ENST00000427943 GOT2P00505 430 aaKnown RBP17.89■□□□□ 0.45
PSPC1-202ENST00000427943 APRTP07741 180 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms