RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TMOD1P28289 359 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 DUSP1P28562 367 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 NMT1P30419 496 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MAPK4P31152 587 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ARRB2P32121 409 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 STX2P32856 288 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 GALNSP34059 522 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 NSFP46459 744 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 RPL21P46778 160 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 GPC3P51654 580 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 RBM5P52756 815 aaKnown RBP eCLIP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 PSMC6P62333 389 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 IL9RQ01113 521 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CDR2Q01850 454 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 GCNT1Q02742 428 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TLE3Q04726 772 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 RNASELQ05823 741 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TRPC3Q13507 836 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 BFSP2Q13515 415 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MESDQ14696 234 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CRYMQ14894 314 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 SLC45A4Q5BKX6 768 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TNFAIP8L3Q5GJ75 292 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 APOBEC3HQ6NTF7 200 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 NEK10Q6ZWH5 1172 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 FASTKD5Q7L8L6 764 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 KRT27Q7Z3Y8 459 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 SPATA21Q7Z572 469 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 P3H2Q8IVL5 708 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 FAM71AQ8IYT1 594 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 OR8H2Q8N162 312 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CERS5Q8N5B7 392 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 PRELID2Q8N945 189 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 N4BP2L2Q92802 583 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CD101Q93033 1021 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ARHGEF26Q96DR7 871 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 KTI12Q96EK9 354 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MASTLQ96GX5 879 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 REXO5Q96IC2 774 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 FAR2Q96K12 515 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MAGEB18Q96M61 343 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CFAP57Q96MR6 1250 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 JPH2Q9BR39 696 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CENPOQ9BU64 300 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CINPQ9BW66 212 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 STRA6Q9BX79 667 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 FRMD8P1Q9BZ68 369 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 BRD8Q9H0E9 1235 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 DEFB129Q9H1M3 183 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 CDC42EP4Q9H3Q1 356 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ERVK-5Q9HDB9 667 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 UBE2TQ9NPD8 197 aaPredicted RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TMLHEQ9NVH6 421 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 MDFICQ9P1T7 246 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ANAPC7Q9UJX3 599 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 RPL26L1Q9UNX3 145 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ARL2BPQ9Y2Y0 163 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 DERAQ9Y315 318 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 SNX24Q9Y343 169 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 ALG6Q9Y672 507 aa5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TCF20Q9UGU0 1960 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 BRCA1P38398 1863 aaKnown RBP5.07□□□□□ -1.6
LINC00458-202ENST00000427299 TRBV5-3A0A0A0MS03 114 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 A0A1W2PRG0 241 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 TMEM120BA0PK00 339 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SMIM23A6NLE4 172 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 F8W810 466 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 WDR46O15213 610 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 ECE2O60344 883 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SLITRK3O94933 977 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 GH2P01242 217 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 NQO1P15559 274 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 TBXAS1P24557 533 aaPredicted RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 ALDH3A1P30838 453 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 HOXA13P31271 388 aaPredicted RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 PHBP35232 272 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 QARSP47897 775 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 CLNS1AP54105 237 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SLC18A1P54219 525 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SLC12A2P55011 1212 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 DCAF7P61962 342 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 WDR5P61964 334 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 RAE1P78406 368 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 ELF3P78545 371 aaPredicted RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 GTF2BQ00403 316 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 RPS6KA2Q15349 733 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 INPP5JQ15735 1006 aaPredicted RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SNRNP35Q16560 246 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 ODF3L2Q3SX64 289 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 MAP3K21Q5TCX8 1036 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 GJB7Q6PEY0 223 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 RBM44Q6ZP01 1051 aaKnown RBP5.06□□□□□ -1.6
LINC00458-202ENST00000427299 SYT13Q7L8C5 426 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 PIGWQ7Z7B1 504 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 CCDC25Q86WR0 208 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 CEP57Q86XR8 500 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 TDRPQ86YL5 185 aa5.06□□□□□ -1.6
LINC00458-202ENST00000427299 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms