RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HAPLN1P10915 354 aaPredicted RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 HMGA1P17096 107 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ATF6P18850 670 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TNFRSF1BP20333 461 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 OR1D2P34982 312 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 CYLC1P35663 651 aaPredicted RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 USP8P40818 1118 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 KRT83P78385 493 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TSPY1Q01534 308 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 BST2Q10589 180 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 MAMLD1Q13495 774 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 GOLGA7BQ2TAP0 167 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 MINDY4Q4G0A6 757 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 CTXN3Q4LDR2 81 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TDRD12Q587J7 1177 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 MDH1BQ5I0G3 518 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 N4BP2L1Q5TBK1 243 aaPredicted RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TAF3Q5VWG9 929 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SNX30Q5VWJ9 437 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 NAA35Q5VZE5 725 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TRNP1Q6NT89 227 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF549Q6P9A3 640 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SLC26A9Q7LBE3 791 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 PIGZQ86VD9 579 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ZSCAN30Q86W11 494 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 METTL23Q86XA0 190 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 DNAAF5Q86Y56 855 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 DCP1BQ8IZD4 617 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 THEM5Q8N1Q8 247 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ATAD1Q8NBU5 361 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ZBTB44Q8NCP5 570 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM35BQ8NCS4 154 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 C1orf131Q8NDD1 294 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SPPL2BQ8TCT7 592 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SLC22A17Q8WUG5 538 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 CASP10Q92851 521 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 ARHGEF26Q96DR7 871 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TRMT61AQ96FX7 289 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 P2RY11Q96G91 374 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 SMARCD1Q96GM5 515 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 PIWIL1Q96J94 861 aaKnown RBP5.59□□□□□ -1.51
C9orf3-205ENST00000427193 KLHL5Q96PQ7 755 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 FCRL5Q96RD9 977 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 KCNK16Q96T55 309 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TTLL2Q9BWV7 592 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 FAM49BQ9NUQ9 324 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM45AQ9NWC5 275 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 FBXW11Q9UKB1 542 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 FBXO4Q9UKT5 387 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 PLXNA4Q9HCM2 1894 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 LAMA1P25391 3075 aa5.59□□□□□ -1.51
C9orf3-205ENST00000427193 RALGAPA1Q6GYQ0 2036 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ASXL3Q9C0F0 2248 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SIGLEC16A6NMB1 481 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SRRM3A6NNA2 597 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 F8VP50 259 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 ZNF500O60304 480 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 IGLV3-25P01717 112 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 URODP06132 367 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 H2AFZP0C0S5 128 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CCDC175P0C221 793 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 FAM200BP0CF97 657 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 T-ENOLP0DO92 83 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 GLULP15104 373 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 RPL17P18621 184 aaKnown RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 TNFAIP3P21580 790 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 BDNFP23560 247 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 RRM1P23921 792 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CYP2F1P24903 491 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 GALNSP34059 522 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CDKN2AP42771 156 aaKnown RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 MAGEA1P43355 309 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 PGFP49763 221 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CLCN4P51793 760 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SLC12A2P55011 1212 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 DNASE1L3Q13609 305 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 KCNAB1Q14722 419 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 POLD3Q15054 466 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SLC39A12Q504Y0 691 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SOWAHCQ53LP3 525 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 MANEAQ5SRI9 462 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CCDC122Q5T0U0 273 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 MANEALQ5VSG8 457 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 OTUD1Q5VV17 481 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 C4orf50Q6ZRC1 276 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 FAM57BQ71RH2 274 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 H2AFVQ71UI9 128 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 SCD5Q86SK9 330 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 TMEM150AQ86TG1 271 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 VPS36Q86VN1 386 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 LURAP1LQ8IV03 231 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 RNF10Q8N5U6 811 aaKnown RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 NIPA2Q8N8Q9 360 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 UBA3Q8TBC4 463 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 HDAC7Q8WUI4 952 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 LRTOMTQ8WZ04 291 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 RFFLQ8WZ73 363 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 IRGQQ8WZA9 623 aa5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CENPIQ92674 756 aaPredicted RBP5.58□□□□□ -1.52
C9orf3-205ENST00000427193 CD101Q93033 1021 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms