RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SRRM3A6NNA2 597 aaPredicted RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 SMAPO00193 183 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 PFDN6O15212 129 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 BANF1O75531 89 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 PGAM1P18669 254 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 ITIH1P19827 911 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 OGNP20774 298 aaKnown RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 RPS3P23396 243 aaKnown RBP eCLIP17.59■□□□□ 0.41
HERC3-205ENST00000426683 NDUFS1P28331 727 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 CCR7P32248 378 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 CAPZBP47756 277 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 CSE1LP55060 971 aaKnown RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 GFERP55789 205 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 EIF3BP55884 814 aaKnown RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 THOC5Q13769 683 aaKnown RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 BBS9Q3SYG4 887 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 MSS51Q4VC12 460 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 RNF187Q5TA31 235 aaPredicted RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 LRRC6Q86X45 466 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 KRT222Q8N1A0 295 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 ZFPM2Q8WW38 1151 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 FGF11Q92914 225 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 PWWP2AQ96N64 755 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 TGM7Q96PF1 710 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 TCF12Q99081 682 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 KIR3DX1Q9H7L2 352 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 THSD1Q9NS62 852 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 C20orf96Q9NUD7 363 aaPredicted RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 SLC24A2Q9UI40 661 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 SNX24Q9Y343 169 aa17.59■□□□□ 0.41
HERC3-205ENST00000426683 UNC13CQ8NB66 2214 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 MN1Q10571 1320 aaPredicted RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 FAM187AA6NFU0 413 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 CAPN5O15484 640 aaPredicted RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 RAD51CO43502 376 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 ITGA2BP08514 1039 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 FMO4P31512 558 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 CSTF2P33240 577 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERC3-205ENST00000426683 MLLT3P42568 568 aaPredicted RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 ERVPABLB-1P60509 514 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 PLOD1Q02809 727 aaPredicted RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 LONRF1Q17RB8 773 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 ZNF470Q6ECI4 717 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 CENPUQ71F23 418 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 MAATS1Q7Z4T9 603 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 CILP2Q8IUL8 1156 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 PDIK1LQ8N165 341 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
HERC3-205ENST00000426683 AGBL5Q8NDL9 886 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 PHC3Q8NDX5 983 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 LPGAT1Q92604 370 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 ZNF592Q92610 1267 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 TFGQ92734 400 aaPredicted RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 PANX3Q96QZ0 392 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 EBNA1BP2Q99848 306 aaKnown RBP17.58■□□□□ 0.4
HERC3-205ENST00000426683 FAM169AQ9Y6X4 670 aa17.58■□□□□ 0.4
HERC3-205ENST00000426683 CDRT15L2A8MXV6 281 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 BHMG1C9JSJ3 638 aaPredicted RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 URI1O94763 535 aaPredicted RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 C9P02748 559 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 CCL4P13236 92 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 ETV5P41161 510 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 LEPRP48357 1165 aaKnown RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 MAPK10P53779 464 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 CKAP4Q07065 602 aaKnown RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 HSPA14Q0VDF9 509 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 CTSL3PQ5NE16 218 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 KLHL35Q6PF15 583 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 ARHGAP22Q7Z5H3 698 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 ACVR1CQ8NER5 493 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 SNIP1Q8TAD8 396 aaKnown RBP17.57■□□□□ 0.4
HERC3-205ENST00000426683 ASZ1Q8WWH4 475 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 C9orf72Q96LT7 481 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 DCBLD2Q96PD2 775 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 MVB12BQ9H7P6 319 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 CDC23Q9UJX2 597 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 CRYL1Q9Y2S2 319 aa17.57■□□□□ 0.4
HERC3-205ENST00000426683 NDC80O14777 642 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 TTC4O95801 387 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 APOA4P06727 396 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 F7P08709 466 aaPredicted RBP17.56■□□□□ 0.4
HERC3-205ENST00000426683 ACADLP28330 430 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 ARL4CP56559 192 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 CTBP1Q13363 440 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 CRYMQ14894 314 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 TMED2Q15363 201 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 HIF1AQ16665 826 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 HP1BP3Q5SSJ5 553 aaPredicted RBP17.56■□□□□ 0.4
HERC3-205ENST00000426683 IRGCQ6NXR0 463 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 ZNF572Q7Z3I7 529 aaPredicted RBP17.56■□□□□ 0.4
HERC3-205ENST00000426683 CLEC14AQ86T13 490 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 IGDCC3Q8IVU1 814 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 DENND6AQ8IWF6 608 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 LMNTD2Q8IXW0 634 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 BBOF1Q8ND07 529 aa17.56■□□□□ 0.4
HERC3-205ENST00000426683 CALML6Q8TD86 181 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms