RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
SNX3-204ENST00000426155 C17orf113A0A1B0GUU1 675 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 CD3EAPO15446 510 aaKnown RBP13.29□□□□□ -0.28
SNX3-204ENST00000426155 SNRNP200O75643 2136 aaKnown RBP13.29□□□□□ -0.28
SNX3-204ENST00000426155 AP2A2O94973 939 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 ARCN1P48444 511 aaKnown RBP13.29□□□□□ -0.28
SNX3-204ENST00000426155 SEPHS1P49903 392 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 CSE1LP55060 971 aaKnown RBP13.29□□□□□ -0.28
SNX3-204ENST00000426155 CDK16Q00536 496 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 ANKS6Q68DC2 871 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 CREG2Q8IUH2 290 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 PLXDC1Q8IUK5 500 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 RBM12BQ8IXT5 1001 aaKnown RBP13.29□□□□□ -0.28
SNX3-204ENST00000426155 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 ELMO1Q92556 727 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 PEX13Q92968 403 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 C9orf72Q96LT7 481 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 SERPINB12Q96P63 405 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 KIFC1Q9BW19 673 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 EPB41L1Q9H4G0 881 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 CPNE5Q9HCH3 593 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 SLC24A2Q9UI40 661 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 B3GALT1Q9Y5Z6 326 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 MGAQ8IWI9 3026 aa13.29□□□□□ -0.28
SNX3-204ENST00000426155 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
SNX3-204ENST00000426155 RRP9O43818 475 aaKnown RBP13.28□□□□□ -0.28
SNX3-204ENST00000426155 RASSF9O75901 435 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 VAPBO95292 243 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 FTH1P02794 183 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 PTGIRP43119 386 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 SH3BP2P78314 561 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 PPP1R7Q15435 360 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 SYTL3Q4VX76 610 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 CASC4Q6P4E1 433 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 CERS6Q6ZMG9 384 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 PDZD3Q86UT5 571 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 ZNF669Q96BR6 464 aaPredicted RBP13.28□□□□□ -0.28
SNX3-204ENST00000426155 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 FERD3LQ96RJ6 166 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 KIR3DX1Q9H7L2 352 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 MRM3Q9HC36 420 aaKnown RBP13.28□□□□□ -0.28
SNX3-204ENST00000426155 SIDT1Q9NXL6 827 aaKnown RBP13.28□□□□□ -0.28
SNX3-204ENST00000426155 SLC39A1Q9NY26 324 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
SNX3-204ENST00000426155 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 OR6C74A6NCV1 312 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 OR5K3A6NET4 321 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 AP3B1O00203 1094 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 BANF1O75531 89 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 ANKRD34CP0C6C1 535 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 OR56A5P0C7T3 313 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 CCR7P32248 378 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 CXADRP78310 365 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 PRKG2Q13237 762 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 PTK6Q13882 451 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 KRT33BQ14525 404 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 RNASEH2BQ5TBB1 312 aaKnown RBP13.27□□□□□ -0.29
SNX3-204ENST00000426155 LYPLAL1Q5VWZ2 237 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 VASH2Q86V25 355 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 VRK3Q8IV63 474 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 SPNS2Q8IVW8 549 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 OR5AR1Q8NGP9 310 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 SGSM3Q96HU1 749 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 FCRL3Q96P31 734 aaPredicted RBP13.27□□□□□ -0.29
SNX3-204ENST00000426155 TAAR9Q96RI9 348 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 P2RY12Q9H244 342 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 ZNF768Q9H5H4 540 aaKnown RBP13.27□□□□□ -0.29
SNX3-204ENST00000426155 XKR8Q9H6D3 395 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 ASIC3Q9UHC3 531 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 ANAPC5Q9UJX4 755 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 ACSL6Q9UKU0 697 aa13.27□□□□□ -0.29
SNX3-204ENST00000426155 IGHV5-51A0A0C4DH38 117 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 UBA6A0AVT1 1052 aaPredicted RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 SLC5A10A0PJK1 596 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 B4E171 279 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 QSOX1O00391 747 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 IFRD1O00458 451 aaPredicted RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 DNALI1O14645 258 aaPredicted RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 LIN7AO14910 233 aaPredicted RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 LIPCP11150 499 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 MLNP12872 115 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 TSPAN7P41732 249 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 MAGEA3P43357 314 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 SARNPP82979 210 aaKnown RBP13.26□□□□□ -0.29
SNX3-204ENST00000426155 KCNAB1Q14722 419 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 ZNF789Q5FWF6 425 aa13.26□□□□□ -0.29
SNX3-204ENST00000426155 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms