RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KPNA5O15131 536 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 VIPP01282 170 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 CLCN7P51798 805 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 NR1D2Q14995 579 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 KBTBD12Q3ZCT8 623 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 RBM20Q5T481 1227 aaKnown RBP23.93■■□□□ 1.42
VEGFA-209ENST00000425836 DGLUCYQ7Z3D6 616 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 VRK3Q8IV63 474 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 TRIM48Q8IWZ4 208 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 POT1Q9NUX5 634 aa23.93■■□□□ 1.42
VEGFA-209ENST00000425836 IMP3Q9NV31 184 aaKnown RBP23.93■■□□□ 1.42
VEGFA-209ENST00000425836 SLCO2B1O94956 709 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 MTHFD1P11586 935 aaKnown RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 TMED2Q15363 201 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 PLEKHS1Q5SXH7 462 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 CCNI2Q6ZMN8 369 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 PDZD3Q86UT5 571 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 ZC3HC1Q86WB0 502 aaKnown RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 ZNF761Q86XN6 746 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 SLC22A15Q8IZD6 547 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 Q8N9G6 341 aaPredicted RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 MCMBPQ9BTE3 642 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 STN1Q9H668 368 aaKnown RBP23.92■■□□□ 1.42
VEGFA-209ENST00000425836 SLC40A1Q9NP59 571 aa23.92■■□□□ 1.42
VEGFA-209ENST00000425836 IFRD1O00458 451 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 CASC3O15234 703 aaKnown RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 ACSL3O95573 720 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 ACADLP28330 430 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 TIAL1Q01085 375 aaKnown RBP eCLIP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 E2F1Q01094 437 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 DUS1LQ6P1R4 473 aaKnown RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 DHRS13Q6UX07 377 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 CTAGE3PQ8IX95 158 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SH3KBP1Q96B97 665 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SLC30A3Q99726 388 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 FUT8Q9BYC5 575 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 CORO1CQ9ULV4 474 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 ARHGEF17Q96PE2 2063 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 B4GAT1O43505 415 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 CDK4P11802 303 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 PHBP35232 272 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 GPR3P46089 330 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 EFTUD2Q15029 972 aaKnown RBP eCLIP23.91■■□□□ 1.424e-10■■■■■ 38.6
VEGFA-209ENST00000425836 ERCC6LQ2NKX8 1250 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 N4BP2L1Q5TBK1 243 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SPRED1Q7Z699 444 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SPNS2Q8IVW8 549 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 ZBTB2Q8N680 514 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SIDT2Q8NBJ9 832 aaKnown RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 GIMAP7Q8NHV1 300 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 TFGQ92734 400 aaPredicted RBP23.91■■□□□ 1.42
VEGFA-209ENST00000425836 ATXN7L3BQ96GX2 97 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 SLC38A3Q99624 504 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 GPR21Q99679 349 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 TXLNGYQ9BZA5 131 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 KLHL42Q9P2K6 505 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 DHRS7Q9Y394 339 aa23.91■■□□□ 1.42
VEGFA-209ENST00000425836 OPA1O60313 960 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 ALDH4A1P30038 563 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 CDKN2DP55273 166 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 OR1D5P58170 312 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 VSNL1P62760 191 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 GBX1Q14549 363 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 TMEM26Q6ZUK4 368 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 PPM1NQ8N819 430 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 GPATCH11Q8N954 259 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.9■■□□□ 1.425e-12■■■■■ 46.3
VEGFA-209ENST00000425836 CPNE1Q99829 537 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 ABCG4Q9H172 646 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 UCK1Q9HA47 277 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 VWA7Q9Y334 891 aa23.9■■□□□ 1.42
VEGFA-209ENST00000425836 VPS26AO75436 327 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 PMS2P54278 862 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 CCL7P80098 99 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 ACSBG2Q5FVE4 666 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 HECTD2Q5U5R9 776 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 TRMT10CQ7L0Y3 403 aaKnown RBP23.89■■□□□ 1.41
VEGFA-209ENST00000425836 RBM12BQ8IXT5 1001 aaKnown RBP23.89■■□□□ 1.41
VEGFA-209ENST00000425836 PHC3Q8NDX5 983 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 CD200R1Q8TD46 325 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 ADAMTS14Q8WXS8 1223 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.89■■□□□ 1.41
VEGFA-209ENST00000425836 RHOJQ9H4E5 214 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 TXNDC16Q9P2K2 825 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 HEBP2Q9Y5Z4 205 aa23.89■■□□□ 1.41
VEGFA-209ENST00000425836 GP5P40197 560 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 INSM1Q01101 510 aaPredicted RBP23.88■■□□□ 1.41
VEGFA-209ENST00000425836 NAB1Q13506 487 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 GPR18Q14330 331 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 ACVR1CQ8NER5 493 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 INPP5DQ92835 1189 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 FERD3LQ96RJ6 166 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 CYTH2Q99418 400 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 LRRN3Q9H3W5 708 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 ACSS3Q9H6R3 686 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 KCNK4Q9NYG8 393 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 TAS2R13Q9NYV9 303 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 COLEC10Q9Y6Z7 277 aa23.88■■□□□ 1.41
VEGFA-209ENST00000425836 A0A1W2PQM1 296 aa23.87■■□□□ 1.41
VEGFA-209ENST00000425836 RPLP0P05388 317 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms