RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FER1L5A0AVI2 2057 aa14.57□□□□□ -0.08
ATG4B-209ENST00000425239 KLHL33A6NCF5 533 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 WIPF3A6NGB9 483 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 TCP11X1B4DZS4 312 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 BTN3A3O00478 584 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 DDX3YO15523 660 aaKnown RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 SRP72O76094 671 aaKnown RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 PRAMEF1O95521 474 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 TNNT1P13805 278 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 POLR2CP19387 275 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 MSH3P20585 1137 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 GSDMDP57764 484 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 PRR30Q53SZ7 412 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 FHL5Q5TD97 284 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 DENND5AQ6IQ26 1287 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 FAM198BQ6UWH4 519 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 MICALCLQ6ZW33 695 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 CFAP206Q8IYR0 622 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 GLIS1Q8NBF1 620 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 OR4K2Q8NGD2 314 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 P3H4Q92791 437 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 QKIQ96PU8 341 aaKnown RBP eCLIP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 OR52A5Q9H2C5 316 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 GOLPH3Q9H4A6 298 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 C10orf88Q9H8K7 445 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 ACSS2Q9NR19 701 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 KLHL8Q9P2G9 620 aaPredicted RBP14.56□□□□□ -0.08
ATG4B-209ENST00000425239 INTUQ9ULD6 942 aa14.56□□□□□ -0.08
ATG4B-209ENST00000425239 CCDC88CQ9P219 2028 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 C17orf113A0A1B0GUU1 675 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 STX7O15400 261 aaKnown RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 KLF7O75840 302 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 TMEM63AO94886 807 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 POLBP06746 335 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 KLK3P07288 261 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 ST6GAL1P15907 406 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 PRDX3P30048 256 aaKnown RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 MARCKSL1P49006 195 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 PRLHRP49683 370 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 ARL4DP49703 201 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 PDE1BQ01064 536 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 TAF1AQ15573 450 aaPredicted RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 TFDP3Q5H9I0 405 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 KAZNQ674X7 775 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 KATNAL2Q8IYT4 538 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 SSC4DQ8WTU2 575 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 CPT1BQ92523 772 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 SMAD5Q99717 465 aaKnown RBP14.55□□□□□ -0.08
ATG4B-209ENST00000425239 DEF6Q9H4E7 631 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 ASB8Q9H765 288 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 FKBPLQ9UIM3 349 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 TRHDEQ9UKU6 1024 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 LRBAP50851 2863 aa14.55□□□□□ -0.08
ATG4B-209ENST00000425239 DOPEY1Q5JWR5 2465 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 IGLV3-16A0A075B6K0 115 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 HACD1B0YJ81 288 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 GOLGA6L19H0YKK7 550 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 PSTPIP1O43586 416 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 HCRTR1O43613 425 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 AGFG2O95081 481 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 RBL1P28749 1068 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 VAV2P52735 878 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 EIF2S3LQ2VIR3 472 aaKnown RBP14.54□□□□□ -0.08
ATG4B-209ENST00000425239 TMTC4Q5T4D3 741 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 VSTM4Q8IW00 320 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 KLHDC8BQ8IXV7 354 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 ADGRF3Q8IZF5 1079 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 EFCAB3Q8N7B9 438 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 ACVR1CQ8NER5 493 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 OR13C4Q8NGS5 318 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 HAUS1Q96CS2 278 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 TRAPPC9Q96Q05 1148 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 C19orf43Q9BQ61 176 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 GBA3Q9H227 469 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 TFB2MQ9H5Q4 396 aaKnown RBP14.54□□□□□ -0.08
ATG4B-209ENST00000425239 SYTL2Q9HCH5 934 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 CUEDC1Q9NWM3 386 aaPredicted RBP14.54□□□□□ -0.08
ATG4B-209ENST00000425239 ZNF451Q9Y4E5 1061 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 COLEC10Q9Y6Z7 277 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 PIKFYVEQ9Y2I7 2098 aa14.54□□□□□ -0.08
ATG4B-209ENST00000425239 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 BTN3A1O00481 513 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 MFAP3LO75121 409 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
ATG4B-209ENST00000425239 SLC35G4P0C7Q5 338 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 TPBGLP0DKB5 382 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 PYGMP11217 842 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 NDUFS1P28331 727 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 PDHA2P29803 388 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 AKT1P31749 480 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 GABRA4P48169 554 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 CDKN1CP49918 316 aaPredicted RBP14.53□□□□□ -0.08
ATG4B-209ENST00000425239 MRPL49Q13405 166 aaKnown RBP14.53□□□□□ -0.08
ATG4B-209ENST00000425239 TRIM14Q14142 442 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 CRB2Q5IJ48 1285 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 SLC6A19Q695T7 634 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 CDHR3Q6ZTQ4 885 aa14.53□□□□□ -0.08
ATG4B-209ENST00000425239 BBS12Q6ZW61 710 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms