RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NAT14Q8WUY8 206 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 ELMO2Q96JJ3 720 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 RAB6BQ9NRW1 208 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 TP53TG5Q9Y2B4 290 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 JRKLQ9Y4A0 524 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 AGAP14A8MT82 685 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 AP2A1O95782 977 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ZSCAN5DPP0CG00 497 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 MSNP26038 577 aaKnown RBP12.66□□□□□ -0.38
VRK3-203ENST00000424804 XIAPP98170 497 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ITGA9Q13797 1035 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
VRK3-203ENST00000424804 CCNG2Q16589 344 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 DET1Q7L5Y6 550 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 AMZ2Q86W34 360 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 BEND7Q8N7W2 519 aaPredicted RBP12.66□□□□□ -0.38
VRK3-203ENST00000424804 GLIS1Q8NBF1 620 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 OR52K1Q8NGK4 314 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 MIB2Q96AX9 1013 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 CXorf40BQ96DE9 158 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ZDHHC12Q96GR4 267 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 MS4A14Q96JA4 679 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 MAP3K3Q99759 626 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 FAM96AQ9H5X1 160 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ASB8Q9H765 288 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 LHX9Q9NQ69 397 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 SMOXQ9NWM0 555 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 FAM8A1Q9UBU6 413 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 PSMD13Q9UNM6 376 aa12.66□□□□□ -0.38
VRK3-203ENST00000424804 PCSK5Q92824 1860 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 OR2AG2A6NM03 316 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 CREG1O75629 220 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 RASSF9O75901 435 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 GAS8O95995 478 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 MSH3P20585 1137 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 FDFT1P37268 417 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 CD97P48960 835 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 VPS41P49754 854 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 BASP1P80723 227 aaKnown RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 PDE1BQ01064 536 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 DNASE1L3Q13609 305 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 UBAP2LQ14157 1087 aaKnown RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 TRIP13Q15645 432 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 ZNF658BQ4V348 819 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 CCDC38Q502W7 563 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 LACTB2Q53H82 288 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 ZRANB3Q5FWF4 1079 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 LDLRAP1Q5SW96 308 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 DENND5AQ6IQ26 1287 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 IRGCQ6NXR0 463 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 DUS1LQ6P1R4 473 aaKnown RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 FAM199XQ6PEV8 388 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 ZNF517Q6ZMY9 492 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PPP1R3BQ86XI6 285 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 RASGRP3Q8IV61 690 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 D2HGDHQ8N465 521 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 LILRA3Q8N6C8 439 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 SPDYE1Q8NFV5 336 aaPredicted RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 ZNF398Q8TD17 642 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 FCRL4Q96PJ5 515 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 AP1M1Q9BXS5 423 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 TRIM55Q9BYV6 548 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PAK5Q9P286 719 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 ANKMY1Q9P2S6 941 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 CRLS1Q9UJA2 301 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 TLK1Q9UKI8 766 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PADI1Q9ULC6 663 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
VRK3-203ENST00000424804 CFAP20Q9Y6A4 193 aaKnown RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.38
VRK3-203ENST00000424804 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 OR5K3A6NET4 321 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 USP27XA6NNY8 438 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 KATNA1O75449 491 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 SRP72O76094 671 aaKnown RBP12.64□□□□□ -0.39
VRK3-203ENST00000424804 APRTP07741 180 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 EBLN1P0CF75 366 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 MTHFD1P11586 935 aaKnown RBP12.64□□□□□ -0.39
VRK3-203ENST00000424804 MC4RP32245 332 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 RPL22P35268 128 aaKnown RBP12.64□□□□□ -0.39
VRK3-203ENST00000424804 GSE1Q14687 1217 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 CAPRIN2Q6IMN6 1127 aaKnown RBP12.64□□□□□ -0.39
VRK3-203ENST00000424804 LCN10Q6JVE6 187 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 FBXO38Q6PIJ6 1188 aa12.64□□□□□ -0.39
VRK3-203ENST00000424804 APLFQ8IW19 511 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms