RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 RAB33BQ9H082 229 aa18.24■□□□□ 0.51
PRNP-202ENST00000424424 OR52A5Q9H2C5 316 aa18.24■□□□□ 0.51
PRNP-202ENST00000424424 KIR3DX1Q9H7L2 352 aa18.24■□□□□ 0.51
PRNP-202ENST00000424424 MARCH4Q9P2E8 410 aaPredicted RBP18.24■□□□□ 0.51
PRNP-202ENST00000424424 EPHA6Q9UF33 1036 aa18.24■□□□□ 0.51
PRNP-202ENST00000424424 ADAMTS20P59510 1910 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 EFCAB7A8K855 629 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 TOX3O15405 576 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 FGF3P11487 239 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 CCL4P13236 92 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 PDHA2P29803 388 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 ETV5P41161 510 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 PTGIRP43119 386 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 PREPP48147 710 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 GFERP55789 205 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 ETF1P62495 437 aaKnown RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 DHX34Q14147 1143 aaKnown RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 BRD3Q15059 726 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 ZNF658BQ4V348 819 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 BROXQ5VW32 411 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 PTRHD1Q6GMV3 140 aaKnown RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 ARMC6Q6NXE6 501 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 IRGCQ6NXR0 463 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 LRRC6Q86X45 466 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 RSC1A1Q92681 617 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 TFGQ92734 400 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 ZNF669Q96BR6 464 aaPredicted RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 PANX3Q96QZ0 392 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 TCF12Q99081 682 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 MVB12BQ9H7P6 319 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 SLC24A2Q9UI40 661 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 GNPTGQ9UJJ9 305 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 RALYQ9UKM9 306 aaKnown RBP18.23■□□□□ 0.51
PRNP-202ENST00000424424 MAD1L1Q9Y6D9 718 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 RPS6KL1Q9Y6S9 549 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 ZZEF1O43149 2961 aa18.23■□□□□ 0.51
PRNP-202ENST00000424424 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
PRNP-202ENST00000424424 RASSF9O75901 435 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 ANKRD34CP0C6C1 535 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 RAB15P59190 212 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 ANKRD20A4Q4UJ75 823 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 IZUMO3Q5VZ72 239 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 C19orf48Q6RUI8 117 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 PDZD3Q86UT5 571 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 OOSP2Q86WS3 158 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 C17orf53Q8N3J3 647 aaPredicted RBP18.22■□□□□ 0.51
PRNP-202ENST00000424424 ASZ1Q8WWH4 475 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 JPH3Q8WXH2 748 aaPredicted RBP18.22■□□□□ 0.51
PRNP-202ENST00000424424 HRASLS2Q9NWW9 162 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 SLC39A1Q9NY26 324 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 APC2O95996 2303 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 FREM2Q5SZK8 3169 aa18.22■□□□□ 0.51
PRNP-202ENST00000424424 DMXL2Q8TDJ6 3036 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 SLC5A10A0PJK1 596 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 B4E171 279 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 GOLGA8KD6RF30 607 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 GOLGA8TH3BQL2 631 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 SMAPO00193 183 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 KPNA5O15131 536 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 KLK10O43240 276 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 PRAMEF10O60809 474 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 USP1O94782 785 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 APOA4P06727 396 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 ITGB6P18564 788 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 OGNP20774 298 aaKnown RBP18.21■□□□□ 0.51
PRNP-202ENST00000424424 RPS3P23396 243 aaKnown RBP eCLIP18.21■□□□□ 0.515e-7■■■■■ 34.6
PRNP-202ENST00000424424 ARNTP27540 789 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 CD82P27701 267 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 TSPAN7P41732 249 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 MAGEA3P43357 314 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 PRKAA1Q13131 559 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 THOC5Q13769 683 aaKnown RBP18.21■□□□□ 0.51
PRNP-202ENST00000424424 TMED2Q15363 201 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 DCAF12Q5T6F0 453 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 CACHD1Q5VU97 1274 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 NEPROQ6NW34 567 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 SYT10Q6XYQ8 523 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 TMEM135Q86UB9 458 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 SPACA3Q8IXA5 215 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 ART4Q93070 314 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 SIGLEC10Q96LC7 697 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 DDA1Q9BW61 102 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 ASPSCR1Q9BZE9 553 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 OCIAD1Q9NX40 245 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 ACSL6Q9UKU0 697 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 VPS9D1Q9Y2B5 631 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 FAM208BQ5VWN6 2430 aa18.21■□□□□ 0.51
PRNP-202ENST00000424424 OR5K3A6NET4 321 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 C9orf172C9J069 976 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 FANCGO15287 622 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 KDM1AO60341 852 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 ITPKBP27987 946 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 LEPRP48357 1165 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 ARCN1P48444 511 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 EIF3BP55884 814 aaKnown RBP18.2■□□□□ 0.5
PRNP-202ENST00000424424 HSPA14Q0VDF9 509 aa18.2■□□□□ 0.5
PRNP-202ENST00000424424 MORF4L2Q15014 288 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms