RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 TCRBV5S2A0A599 114 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 A8MX80 341 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 H0YAE9 185 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 H3BNC9 293 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 H7C0S8 307 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ACOX3O15254 700 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KRT6AP02538 564 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KRT6BP04259 564 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MZF1P28698 734 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GDF5P43026 501 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KRT6CP48668 564 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MRPL19P49406 292 aaKnown RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ALDH3A2P51648 485 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CLCN7P51798 805 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 AP1S1P61966 158 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CRY1Q16526 586 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TAS1R1Q7RTX1 841 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OVCA2Q8WZ82 227 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MAGEE1Q9HCI5 957 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TBC1D23Q9NUY8 699 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF490Q9ULM2 529 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LSM1O15116 133 aaKnown RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HMGCS1Q01581 520 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BROXQ5VW32 411 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CHST15Q7LFX5 561 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GPR180Q86V85 440 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HJURPQ8NCD3 748 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PAPD5Q8NDF8 572 aaKnown RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OR8J3Q8NGG0 315 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PDLIM5Q96HC4 596 aaKnown RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MUS81Q96NY9 551 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CASD1Q96PB1 797 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OR52E6Q96RD3 313 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNHIT2Q9UHR6 403 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NLRC5Q86WI3 1866 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ELOVL7A1L3X0 281 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARNTLO00327 626 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DLGAP1O14490 977 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ADAM12O43184 909 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HRH2P25021 359 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EPS8Q12929 822 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GCNT7Q6ZNI0 430 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SNX20Q7Z614 316 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HOMEZQ8IX15 550 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GLB1L3Q8NCI6 653 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZNF420Q8TAQ5 688 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NMRK2Q9NPI5 230 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DFNA5O60443 496 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ALDH1A1P00352 501 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 JAK1P23458 1154 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HOXD10P28358 340 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PMS2P3Q13401 168 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RAB39AQ14964 217 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CPSF6Q16630 551 aaKnown RBP eCLIP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SULT1C3Q6IMI6 304 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SPESP1Q6UW49 350 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 THAP5Q7Z6K1 395 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LIX1Q8N485 282 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MTFMTQ96DP5 389 aaKnown RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FEM1AQ9BSK4 669 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 AP3M1Q9Y2T2 418 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HEMK1Q9Y5R4 338 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GLYATL1P3A0A0U1RQE8 302 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IL6P05231 212 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HIST1H2AGP0C0S8 130 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HIST1H2ADP20671 130 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 UGT1A1P22309 533 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 UGT1A4P22310 534 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CA8P35219 290 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 UGT1A3P35503 534 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 UGT1A5P35504 534 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CYP4F3Q08477 520 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LYPLAL1Q5VWZ2 237 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SBSNQ6UWP8 590 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DLEU7Q6UYE1 221 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EID3Q8N140 333 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CHCHD4Q8N4Q1 142 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SLC47A1Q96FL8 570 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HIST1H2AHQ96KK5 128 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HIST1H2AJQ99878 128 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 H2AFJQ9BTM1 129 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CCDC90BQ9GZT6 254 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ELOVL6Q9H5J4 265 aa11.49□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARL15Q9NXU5 204 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms