RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FAM90A10PA6NDY2 464 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 POM121BA6NF01 834 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 OR6C75A6NL08 312 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTC34A8MYJ7 566 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 F8VP50 259 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PI4K2BG5E9Z4 385 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 NDC80O14777 642 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MCF2LO15068 1137 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTI1O43156 1089 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PAPSS1O43252 624 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 USP12O75317 370 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRCH4O75427 683 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SEC31AO94979 1220 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 OR4Q2P0C623 313 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ST6GAL1P15907 406 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 BDNFP23560 247 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TNFRSF8P28908 595 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MIPP30301 263 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CA8P35219 290 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 THBS4P35443 961 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PCK1P35558 622 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIK3CBP42338 1070 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PTPN9P43378 593 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC11A1P49279 550 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PEX5P50542 639 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TKTL1P51854 596 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CDH6P55285 790 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ARPP19P56211 112 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DAOAP59103 153 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DYNLT1P63172 113 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MRPS25P82663 173 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MRPS5P82675 430 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC25A11Q02978 314 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CALCOCO2Q13137 446 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SNX1Q13596 522 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DNASE1L3Q13609 305 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CUL1Q13616 776 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TFDP2Q14188 446 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ACOX1Q15067 660 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 LRRC26Q2I0M4 334 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 C15orf59Q2T9L4 293 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 AASDHQ4L235 1098 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC39A12Q504Y0 691 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TFDP3Q5H9I0 405 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM171A1Q5VUB5 890 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 RUSC1-AS1Q66K80 236 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ABLIM2Q6H8Q1 611 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 FUT10Q6P4F1 479 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM57BQ71RH2 274 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLC26A9Q7LBE3 791 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 STRADAQ7RTN6 431 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 GSTA5Q7RTV2 222 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TFAP2DQ7Z6R9 452 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIP4P1Q86T03 277 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TMEM110Q86TL2 294 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAP7D3Q8IWC1 876 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SCN4BQ8IWT1 228 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DEFB106AQ8N104 65 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ATP11CQ8NB49 1132 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 KCTD6Q8NC69 237 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 OR10T2Q8NGX3 314 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CLEC4CQ8WTT0 213 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TEKT4Q8WW24 435 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 IFT81Q8WYA0 676 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TTC17Q96AE7 1141 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 HAUS1Q96CS2 278 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PIWIL1Q96J94 861 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZFYVE19Q96K21 471 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZNF558Q96NG5 402 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CASD1Q96PB1 797 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SLITRK1Q96PX8 696 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRIM51Q9BSJ1 452 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 SNRNP25Q9BV90 132 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 HEMGNQ9BXL5 484 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MAGEB5Q9BZ81 275 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TRIM31Q9BZY9 425 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DCLK3Q9C098 648 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 DPH5Q9H2P9 285 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZBTB26Q9HCK0 441 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 EPB41L5Q9HCM4 733 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 CNGB3Q9NQW8 809 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM114A2Q9NRY5 505 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MARCH5Q9NX47 278 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 COX16Q9P0S2 106 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 MTRF1LQ9UGC7 380 aaKnown RBP3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 ASIC3Q9UHC3 531 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 PCSK1NQ9UHG2 260 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TBX21Q9UL17 535 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 FAM50BQ9Y247 325 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 COL4A6Q14031 1691 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 OBSL1O75147 1896 aa3.86□□□□□ -1.79
HMGB3P20-201ENST00000417997 TET1Q8NFU7 2136 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 COL4A4P53420 1690 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 hCG_1818297A0A087WSY0 165 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 ZSCAN5CA6NGD5 496 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 B4DGG1 531 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 F8W810 466 aa3.85□□□□□ -1.79
HMGB3P20-201ENST00000417997 M0QYT0 321 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms