RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 GFM1Q96RP9 751 aaKnown RBP12.2□□□□□ -0.46
SKA1-203ENST00000417656 TBC1D10AQ9BXI6 508 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 ZDHHC18Q9NUE0 388 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 ANGPTL2Q9UKU9 493 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 NEUROG3Q9Y4Z2 214 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 PCDHB1Q9Y5F3 818 aa12.2□□□□□ -0.46
SKA1-203ENST00000417656 SLC5A10A0PJK1 596 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 LILRA5A6NI73 299 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 ESPNB1AK53 854 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 TCEA3O75764 348 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 ESR1P03372 595 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 PKMP14618 531 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 JUPP14923 745 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 ABCG1P45844 678 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 CARSP49589 748 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 TARDBPQ13148 414 aaKnown RBP eCLIP12.19□□□□□ -0.46
SKA1-203ENST00000417656 RPA4Q13156 261 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 CBLBQ13191 982 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 TMED2Q15363 201 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 GLE1Q53GS7 698 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 DNTTIP2Q5QJE6 756 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 CNSTQ6PJW8 725 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 TMPRSS9Q7Z410 1059 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 B3GNT8Q7Z7M8 397 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 VRK3Q8IV63 474 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 CNTN4Q8IWV2 1026 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 DCBLD1Q8N8Z6 715 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 C2CD4AQ8NCU7 369 aaPredicted RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 OR10G6Q8NH81 332 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 GSDMBQ8TAX9 411 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 PYROXD1Q8WU10 500 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 TMEM159Q96B96 161 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 NUDT22Q9BRQ3 303 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 PHACTR1Q9C0D0 580 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 RDH14Q9HBH5 336 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
SKA1-203ENST00000417656 FAM114A2Q9NRY5 505 aa12.19□□□□□ -0.46
SKA1-203ENST00000417656 IFRD1O00458 451 aaPredicted RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 DUX1O43812 170 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 CPNE6O95741 557 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 APOA4P06727 396 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 AOAHP28039 575 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 CD1CP29017 333 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 SSTR1P30872 391 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 EPHA4P54764 986 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 ADARP55265 1226 aaKnown RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 HSPA14Q0VDF9 509 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 FRG1Q14331 258 aaKnown RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 PLCL1Q15111 1095 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 TEDDM1Q5T9Z0 273 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 ZNF549Q6P9A3 640 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 ZNF449Q6P9G9 518 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 CCNI2Q6ZMN8 369 aaPredicted RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 USP53Q70EK8 1073 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 GABPB2Q8TAK5 448 aaPredicted RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 AHCYL2Q96HN2 611 aaKnown RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 NDNQ99608 321 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 FOXP3Q9BZS1 431 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 UCK1Q9HA47 277 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 TMEM9Q9P0T7 183 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
SKA1-203ENST00000417656 CDYLQ9Y232 598 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
SKA1-203ENST00000417656 FAM221BA6H8Z2 402 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 E5RI56 91 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 H3BMM5 538 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ZW10O43264 779 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 GPC4O75487 556 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 HAUS5O94927 633 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 RHOXF2BP0C7M4 288 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 GABRB3P28472 473 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ECHS1P30084 290 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 MAGEA4P43358 317 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 LEPRP48357 1165 aaKnown RBP12.17□□□□□ -0.46
SKA1-203ENST00000417656 CD151P48509 253 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 GPLD1P80108 840 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 CFHR1Q03591 330 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 MGAT5Q09328 741 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 KRT33BQ14525 404 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 KIAA0408Q6ZU52 694 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 OTOAQ7RTW8 1153 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 SLITRK4Q8IW52 837 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 RBM12BQ8IXT5 1001 aaKnown RBP12.17□□□□□ -0.46
SKA1-203ENST00000417656 SLC22A15Q8IZD6 547 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ZBTB2Q8N680 514 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 GIMAP7Q8NHV1 300 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 ASZ1Q8WWH4 475 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 IFT81Q8WYA0 676 aa12.17□□□□□ -0.46
SKA1-203ENST00000417656 RSC1A1Q92681 617 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms