RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 AKAP1Q92667 903 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CIDECQ96AQ7 238 aaPredicted RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 PTERQ96BW5 349 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 PYCR2Q96C36 320 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 B3GALT6Q96L58 329 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 NECTIN4Q96NY8 510 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 ACOX2Q99424 681 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SLC30A2Q9BRI3 323 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SPATA9Q9BWV2 254 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 BBS2Q9BXC9 721 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 OSBPL2Q9H1P3 480 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 CYP3A43Q9HB55 503 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 EML4Q9HC35 981 aaKnown RBP6.3□□□□□ -1.4
CCNT1-202ENST00000417344 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 COL20A1Q9P218 1284 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 C3orf18Q9UK00 162 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 SLC39A10Q9ULF5 831 aa6.3□□□□□ -1.4
CCNT1-202ENST00000417344 NUP98P52948 1817 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PCM1Q15154 2024 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 A0A0B4J203 849 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 BCKDKO14874 412 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 HNRNPDLO14979 420 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SLC16A6O15403 523 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 YKT6O15498 198 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PRPSAP2O60256 369 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 HUS1O60921 280 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PTP4A3O75365 173 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 TRIM3O75382 744 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FGF18O76093 207 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 MT-CO1P00395 513 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 DNTTP04053 509 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 HMGN1P05114 100 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 LCKP06239 509 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ALDOCP09972 364 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SUPT20HL2P0C7V6 817 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ITGALP20701 1170 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SAT1P21673 171 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 HRH2P25021 359 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CA5AP35218 305 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PIK3CBP42338 1070 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CXCR4P61073 352 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ERVK-21P61565 698 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 DMP1Q13316 513 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 IKZF1Q13422 519 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 IRF3Q14653 427 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 GRM3Q14832 879 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SYT16Q17RD7 645 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 RABL3Q5HYI8 236 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 COQ5Q5HYK3 327 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SH3PXD2AQ5TCZ1 1133 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 IER5Q5VY09 327 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SULT1C3Q6IMI6 304 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FIP1L1Q6UN15 594 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF782Q6ZMW2 699 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 LARP4Q71RC2 724 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SYVN1Q86TM6 617 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CUZD1Q86UP6 607 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 COMMD7Q86VX2 200 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 NPAS3Q8IXF0 933 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 RDH10Q8IZV5 341 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 OR8H3Q8N146 312 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF540Q8NDQ6 660 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 OR8K5Q8NH50 307 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PCDH19Q8TAB3 1148 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 DNAJB14Q8TBM8 379 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SLC22A8Q8TCC7 542 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 LPAR1Q92633 364 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PDLIM5Q96HC4 596 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 VPS39Q96JC1 886 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 C1orf74Q96LT6 269 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 NSMCE2Q96MF7 247 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FRMD6Q96NE9 622 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FCRL3Q96P31 734 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 OMDQ99983 421 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 WACQ9BTA9 647 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 TTLL2Q9BWV7 592 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SLC22A4Q9H015 551 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM168Q9H0V1 697 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 SPNS1Q9H2V7 528 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CATSPERBQ9H7T0 1116 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FBRSL1Q9HCM7 1045 aaKnown RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 TNFRSF12AQ9NP84 129 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CCNB1IP1Q9NPC3 277 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 IFT46Q9NQC8 304 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 BFARQ9NZS9 450 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ENOPH1Q9UHY7 261 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 ELF5Q9UKW6 265 aaPredicted RBP6.29□□□□□ -1.4
CCNT1-202ENST00000417344 RNF6Q9Y252 685 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 CDK5RAP2Q96SN8 1893 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 PTPRJQ12913 1337 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 COL18A1P39060 1754 aa6.29□□□□□ -1.4
CCNT1-202ENST00000417344 A0A0B4J293 547 aa6.28□□□□□ -1.4
CCNT1-202ENST00000417344 SLC12A8A0AV02 714 aa6.28□□□□□ -1.4
CCNT1-202ENST00000417344 DDX39AO00148 427 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms