RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 PDZD3Q86UT5 571 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 ACVR1CQ8NER5 493 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 UBXN4Q92575 508 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 CAPZA3Q96KX2 299 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 SERPINB12Q96P63 405 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 PANX3Q96QZ0 392 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 CD180Q99467 661 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 DDX47Q9H0S4 455 aaKnown RBP13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 ZNF768Q9H5H4 540 aaKnown RBP13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 KCND1Q9NSA2 647 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 SLC39A1Q9NY26 324 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 PCYOX1Q9UHG3 505 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 SLC24A2Q9UI40 661 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 GNPTGQ9UJJ9 305 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 VPS9D1Q9Y2B5 631 aa13.86□□□□□ -0.19
SLC13A3-205ENST00000417157 FAM237BA0A1B0GVD1 139 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 OR5K3A6NET4 321 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 STMND1H3BQB6 276 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 SMAPO00193 183 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 KPNA5O15131 536 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 NDUFS3O75489 264 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 VAPBO95292 243 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 FGF3P11487 239 aaPredicted RBP13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 NMBRP28336 390 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 PTK6Q13882 451 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 ANKRD22Q5VYY1 191 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 DUS1LQ6P1R4 473 aaKnown RBP13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 XKR5Q6UX68 686 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 CEACAM20Q6UY09 585 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 HOOK3Q86VS8 718 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 CREG2Q8IUH2 290 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 CARFQ8N187 725 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 LILRA3Q8N6C8 439 aaPredicted RBP13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 ART4Q93070 314 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 MFSD3Q96ES6 412 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 FERD3LQ96RJ6 166 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 TCF12Q99081 682 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 CARD6Q9BX69 1037 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 FBXO8Q9NRD0 319 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 PRSS21Q9Y6M0 314 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 CACNA1BQ00975 2339 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 ACACAQ13085 2346 aa13.85□□□□□ -0.19
SLC13A3-205ENST00000417157 TLCD2A6NGC4 264 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 C9orf172C9J069 976 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 H3BMM5 538 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 GOLGA8MH3BSY2 632 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 NDC80O14777 642 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 OR1I1O60431 355 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 AVILO75366 819 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 RPN2P04844 631 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 APOA4P06727 396 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 OGNP20774 298 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 RPS3P23396 243 aaKnown RBP eCLIP13.84□□□□□ -0.195e-6■□□□□ 9.1
SLC13A3-205ENST00000417157 ITPKBP27987 946 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 PREPP48147 710 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 LEPRP48357 1165 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 ARL4DP49703 201 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 ATP1A2P50993 1020 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 DR1Q01658 176 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 MC2RQ01718 297 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 DHX34Q14147 1143 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 CACHD1Q5VU97 1274 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 PTRHD1Q6GMV3 140 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 CAND1Q86VP6 1230 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 KMT5CQ86Y97 462 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 LMNTD2Q8IXW0 634 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 BMPERQ8N8U9 685 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 NAT8LQ8N9F0 302 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 GSDMBQ8TAX9 411 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 ASZ1Q8WWH4 475 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 LCN9Q8WX39 176 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 TFGQ92734 400 aaPredicted RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 TRIT1Q9H3H1 467 aaKnown RBP13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 SRMSQ9H3Y6 488 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 HRASLS2Q9NWW9 162 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 OCIAD1Q9NX40 245 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 POLG2Q9UHN1 485 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 ASF1AQ9Y294 204 aa13.84□□□□□ -0.19
SLC13A3-205ENST00000417157 FREM2Q5SZK8 3169 aa13.83□□□□□ -0.19
SLC13A3-205ENST00000417157 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 UBA6A0AVT1 1052 aaPredicted RBP13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 SLC5A10A0PJK1 596 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 DNALI1O14645 258 aaPredicted RBP13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 POLR1CO15160 346 aaPredicted RBP13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 USP1O94782 785 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 PDHA2P29803 388 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 MAGEA3P43357 314 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 ADARP55265 1226 aaKnown RBP13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 CLN3Q13286 438 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 SEMA3AQ14563 771 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 TYSND1Q2T9J0 566 aa13.83□□□□□ -0.2
SLC13A3-205ENST00000417157 DNAJC21Q5F1R6 531 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms