RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 S100A1P23297 94 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GPR1P46091 355 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 BTN2A1Q7KYR7 527 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TAF8Q7Z7C8 310 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CEP97Q8IW35 865 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TCF25Q9BQ70 676 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 EBPLQ9BY08 206 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GSDMCQ9BYG8 508 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 OCEL1Q9H607 264 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 FBXW11Q9UKB1 542 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 OR10H1Q9Y4A9 318 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 MAP4K5Q9Y4K4 846 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CACNA1CQ13936 2221 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 J3KR12 359 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SDHDO14521 159 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 CXCL11O14625 94 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 AURKAO14965 403 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 PLSCR1O15162 318 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 XYLBO75191 536 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 DHFRP00374 187 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 RAB25P57735 213 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SNRPD1P62314 119 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 RAPSNQ13702 412 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 GNA13Q14344 377 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SNAPC1Q16533 368 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 CXorf57Q6NSI4 855 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 CXXC5Q7LFL8 322 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 KBTBD6Q86V97 674 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 ACVR1CQ8NER5 493 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 OR4A15Q8NGL6 344 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 RELTQ969Z4 430 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 AURKBQ96GD4 344 aaPredicted RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 GAL3ST1Q99999 423 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 HERC2P3Q9BVR0 1158 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 GMPR2Q9P2T1 348 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 PPIEQ9UNP9 301 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SAMD4AQ9UPU9 718 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 BMP10O95393 424 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 GNAO1P09471 354 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 CCNYL3P0C7X3 344 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 VBP1P61758 197 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 GRB7Q14451 532 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SUZ12Q15022 739 aaKnown RBP12.71□□□□□ -0.37
SCN1B-202ENST00000415950 CLEC20AQ6ZU45 233 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 HIPK3Q9H422 1215 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SLC35C2Q9NQQ7 365 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 FAM105AQ9NUU6 356 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 STRCQ7RTU9 1775 aa12.71□□□□□ -0.37
SCN1B-202ENST00000415950 SOCS2O14508 198 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 TPST2O60704 377 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 SERPINB7O75635 380 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 IL1BP01584 269 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 TFAP2AP05549 437 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 GPR22Q99680 433 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 RBM4BQ9BQ04 359 aaKnown RBP12.71□□□□□ -0.38
SCN1B-202ENST00000415950 RBM4Q9BWF3 364 aaKnown RBP12.71□□□□□ -0.38
SCN1B-202ENST00000415950 TLE6Q9H808 572 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF224Q9NZL3 707 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 MTRRQ9UBK8 725 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 PHF11Q9UIL8 331 aa12.71□□□□□ -0.38
SCN1B-202ENST00000415950 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 NPHS1O60500 1241 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 DHRS4L1P0CG22 281 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 ACADMP11310 421 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 AKR1A1P14550 325 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 OMPP47874 163 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 OLR1P78380 273 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 TAF10Q12962 218 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 COL9A2Q14055 689 aaPredicted RBP12.7□□□□□ -0.38
SCN1B-202ENST00000415950 SNX29P2Q8IUI4 249 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 RAB2BQ8WUD1 216 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 SUSD6Q92537 303 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 AP3S1Q92572 193 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 PIGKQ92643 395 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 SMOXQ9NWM0 555 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 DKK3Q9UBP4 350 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 SEC14L3Q9UDX4 400 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 FKBPLQ9UIM3 349 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.7□□□□□ -0.38
SCN1B-202ENST00000415950 NRCAMQ92823 1304 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 ARVCFO00192 962 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 MATN3O15232 486 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 STK16O75716 305 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 BEST1O76090 585 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 EDN1P05305 212 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 ZNF12P17014 697 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 RAB39AQ14964 217 aa12.7□□□□□ -0.38
SCN1B-202ENST00000415950 TAF13Q15543 124 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms