RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 TPBGLP0DKB5 382 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 RBP3P10745 1247 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 LPOP22079 712 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 PBLDP30039 288 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 MC1RQ01726 317 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 GPS2Q13227 327 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 GTF2H3Q13889 308 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 GPR19Q15760 415 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 FAM69BQ5VUD6 431 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 KCTD11Q693B1 232 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 DARS2Q6PI48 645 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 MIB2Q96AX9 1013 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZNF514Q96K75 400 aaPredicted RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 TTC25Q96NG3 672 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 FCRL4Q96PJ5 515 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 TWSG1Q9GZX9 223 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 ASB8Q9H765 288 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 FGF21Q9NSA1 209 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 LNPEPQ9UIQ6 1025 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 PLAAQ9Y263 795 aa12.11□□□□□ -0.47
NCKIPSD-203ENST00000415281 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 IGLV3-16A0A075B6K0 115 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 BTN3A3O00478 584 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 METTL18O95568 372 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 VCLP18206 1134 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 PDHA2P29803 388 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 CXCR5P32302 372 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 HALP42357 657 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 GEMP55040 296 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 TUBB3Q13509 450 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 IL10RAQ13651 578 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 TCTN3Q6NUS6 607 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 TMEM151BQ8IW70 566 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 CFAP206Q8IYR0 622 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 UBE2Q2Q8WVN8 375 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 ZFPM2Q8WW38 1151 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 STAMBPL1Q96FJ0 436 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 TLR10Q9BXR5 811 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR52A5Q9H2C5 316 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 ACTL8Q9H568 366 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 KIR3DX1Q9H7L2 352 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 ACSL5Q9ULC5 683 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 PYCARDQ9ULZ3 195 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 PKP3Q9Y446 797 aa12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 USP9YO00507 2555 aaPredicted RBP12.1□□□□□ -0.47
NCKIPSD-203ENST00000415281 CDC14CA4D256 554 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 OR6C74A6NCV1 312 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 C5orf60A6NFR6 353 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 TLCD2A6NGC4 264 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 H3BMH7 237 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 KCNN4O15554 427 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 HCRTR1O43613 425 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 SNRNP200O75643 2136 aaKnown RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 POLBP06746 335 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 MSH3P20585 1137 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 PSMA3P25788 255 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 RORAP35398 523 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 CD97P48960 835 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 PRLHRP49683 370 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 HSD11B2P80365 405 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 TMPRSS15P98073 1019 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 ABRQ12979 859 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 KLF1Q13351 362 aaPredicted RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 SEMA5AQ13591 1074 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 DNTTIP2Q5QJE6 756 aaKnown RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 CPZQ66K79 652 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 KMT5CQ86Y97 462 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 CDKL3Q8IVW4 592 aaPredicted RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 PIANPQ8IYJ0 282 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 NXPE1Q8N323 547 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 SLC35F6Q8N357 371 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 PHC3Q8NDX5 983 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 C12orf66Q96MD2 445 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 FERMT1Q9BQL6 677 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 RARRES3Q9UL19 164 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 BTRCQ9Y297 605 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 R3HDM2Q9Y2K5 976 aaKnown RBP12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 SHANK1Q9Y566 2161 aa12.09□□□□□ -0.47
NCKIPSD-203ENST00000415281 PIPSLA2A3N6 862 aa12.08□□□□□ -0.48
NCKIPSD-203ENST00000415281 SLC9B1P1A6NJY1 282 aa12.08□□□□□ -0.48
NCKIPSD-203ENST00000415281 C21orf140B9A014 251 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms