RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 WNT3AP56704 352 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CDK18Q07002 472 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 KCNJ11Q14654 390 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CPZQ66K79 652 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 SLC30A9Q6PML9 568 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PDIK1LQ8N165 341 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 TAB3Q8N5C8 712 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 NAT8LQ8N9F0 302 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 EXOC2Q96KP1 924 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ANKZF1Q9H8Y5 726 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PCDH12Q9NPG4 1184 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 LATS2Q9NRM7 1088 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ASF1BQ9NVP2 202 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 SIDT1Q9NXL6 827 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 TSPAN11A1L157 253 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 MT-CYBP00156 380 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 MMP2P08253 660 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 MYCLP1P12525 358 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 HLA-DPA1P20036 260 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 MMP12P39900 470 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 RGRP47804 291 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARL4CP56559 192 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 LAMB3Q13751 1172 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 IL11RAQ14626 422 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 UGP2Q16851 508 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARMC12Q5T9G4 340 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARMC3Q5W041 872 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 KCTD11Q693B1 232 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 DNAAF3Q8N9W5 541 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 GPR87Q9BY21 358 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 EPB41L1Q9H4G0 881 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 ACTL8Q9H568 366 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 SUV39H2Q9H5I1 410 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 GRHL1Q9NZI5 618 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 UBP1Q9NZI7 540 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 V9GYY5 206 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 CHD5Q8TDI0 1954 aa13.29□□□□□ -0.28
RAPGEF1-204ENST00000414781 LOC285095A0A1B0GVY8 99 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ESYT3A0FGR9 886 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 MAGEB16A2A368 324 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARGFXA6NJG6 315 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 EIF3HO15372 352 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ERLIN1O75477 346 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 RECQL5O94762 991 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 NDST3O95803 873 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ZNF28P17035 718 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 AK4P27144 223 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 NPY2RP49146 381 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 FOXM1Q08050 763 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 CDH17Q12864 832 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 CHAF1BQ13112 559 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 PCSK7Q16549 785 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 DNAJC21Q5F1R6 531 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 KDELC1Q6UW63 502 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 RANBP10Q6VN20 620 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 CENPUQ71F23 418 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 SYVN1Q86TM6 617 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ST6GALNAC3Q8NDV1 305 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 MLPHQ9BV36 600 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 TDRD1Q9BXT4 1180 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 PHACTR1Q9C0D0 580 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 STN1Q9H668 368 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARNT2Q9HBZ2 717 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 PHPT1Q9NRX4 125 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 BFARQ9NZS9 450 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 PCDHGC4Q9Y5F7 938 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 KLF2Q9Y5W3 355 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 TACC2O95359 2948 aa13.28□□□□□ -0.28
RAPGEF1-204ENST00000414781 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 F5H423 210 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 LRRTM2O43300 516 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 HTRA2O43464 458 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 KIAA0754O94854 1291 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 PGLSO95336 258 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 ADRA1AP35348 466 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 GNPDA1P46926 289 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 CARSP49589 748 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 EPHB1P54762 984 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 EPHA4P54764 986 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 CTBSQ01459 385 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 CBLBQ13191 982 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 ART3Q13508 389 aa13.27□□□□□ -0.29
RAPGEF1-204ENST00000414781 SLMAPQ14BN4 828 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms