RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TMPRSS12Q86WS5 348 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CTAGE4Q8IX94 777 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 GALNT15Q8N3T1 639 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 DCBLD1Q8N8Z6 715 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 PHC3Q8NDX5 983 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 OR6C4Q8NGE1 309 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CERS2Q96G23 380 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ATXN7L3BQ96GX2 97 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 C9orf72Q96LT7 481 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 BIRC8Q96P09 236 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 GFM1Q96RP9 751 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 NDNQ99608 321 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 TTC1Q99614 292 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SLC30A3Q99726 388 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SEMA6CQ9H3T2 930 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 EPB41L5Q9HCM4 733 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SLC40A1Q9NP59 571 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SMYD2Q9NRG4 433 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 POT1Q9NUX5 634 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 KCNK4Q9NYG8 393 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 OGFRQ9NZT2 677 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 FBXO5Q9UKT4 447 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 RUVBL2Q9Y230 463 aaKnown RBP7.54□□□□□ -1.2
CPSF4-202ENST00000412686 CDYLQ9Y232 598 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 MSRB2Q9Y3D2 182 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 NEUROG3Q9Y4Z2 214 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 ENTPD2Q9Y5L3 495 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 BPTFQ12830 3046 aa7.54□□□□□ -1.2
CPSF4-202ENST00000412686 SPEGQ15772 3267 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 SPTBN2O15020 2390 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 KRT87PA6NCN2 255 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 SMAPO00193 183 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 HAUS5O94927 633 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 TTC4O95801 387 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 CDK4P11802 303 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 HGFP14210 728 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 PKMP14618 531 aaKnown RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 SLC2A4P14672 509 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 RPS3P23396 243 aaKnown RBP eCLIP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ECHS1P30084 290 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 GPR3P46089 330 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 GFERP55789 205 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 PRKG2Q13237 762 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 KIF26BQ2KJY2 2108 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 SYTL3Q4VX76 610 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 C3orf38Q5JPI3 329 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 RBM20Q5T481 1227 aaKnown RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ARMC3Q5W041 872 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 RBM44Q6ZP01 1051 aaKnown RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 SDCCAG8Q86SQ7 713 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 LMNTD1Q8N9Z9 388 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 C2CD4AQ8NCU7 369 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 RCBTB1Q8NDN9 531 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 MNS1Q8NEH6 495 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 GIMAP7Q8NHV1 300 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 RSC1A1Q92681 617 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 GATA6Q92908 595 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 FAM167BQ9BTA0 163 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 HGH1Q9BTY7 390 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ZMYND15Q9H091 742 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 STN1Q9H668 368 aaKnown RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 VPS37BQ9H9H4 285 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 PPANQ9NQ55 473 aaKnown RBP7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ZDHHC18Q9NUE0 388 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 CIDEBQ9UHD4 219 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 GNPTGQ9UJJ9 305 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ACSL5Q9ULC5 683 aa7.53□□□□□ -1.2
CPSF4-202ENST00000412686 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
CPSF4-202ENST00000412686 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 TRABD2BA6NFA1 517 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 LILRA5A6NI73 299 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 A8MU76 341 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 CXorf49A8MYA2 514 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-202ENST00000412686 QSOX1O00391 747 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 LIN7AO14910 233 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-202ENST00000412686 DUX1O43812 170 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 GPC4O75487 556 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 TCEA3O75764 348 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 CPNE6O95741 557 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 ESR1P03372 595 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 MPOP05164 745 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 PROS1P07225 676 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 RHOXF2BP0C7M4 288 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 TPBGLP0DKB5 382 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 AMD1P17707 334 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 CHRM3P20309 590 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 AOAHP28039 575 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 ACADLP28330 430 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 PPARGP37231 505 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-202ENST00000412686 LEPRP48357 1165 aaKnown RBP7.52□□□□□ -1.21
CPSF4-202ENST00000412686 INHBCP55103 352 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 GPX6P59796 221 aa7.52□□□□□ -1.21
CPSF4-202ENST00000412686 ZFP36L1Q07352 338 aaKnown RBP7.52□□□□□ -1.21
CPSF4-202ENST00000412686 ABRQ12979 859 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms