RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 CDKL4Q5MAI5 379 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 MBOAT1Q6ZNC8 495 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 DET1Q7L5Y6 550 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 SLC15A3Q8IY34 581 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 CELF5Q8N6W0 485 aaKnown RBP19.74■□□□□ 0.75
USP39-204ENST00000409766 PROKR1Q8TCW9 393 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 SCAMP4Q969E2 229 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 VPS33AQ96AX1 596 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 NR1H4Q96RI1 486 aaPredicted RBP19.74■□□□□ 0.75
USP39-204ENST00000409766 NTMT1Q9BV86 223 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 MCOLN1Q9GZU1 580 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 MTG2Q9H4K7 406 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 CCL27Q9Y4X3 112 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 UPK3BL1B0FP48 263 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 UPK3BL2E5RIL1 263 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 DNAJA2O60884 412 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 EEDO75530 441 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 SMNDC1O75940 238 aaKnown RBP eCLIP19.73■□□□□ 0.75
USP39-204ENST00000409766 RB1P06400 928 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 SLC6A2P23975 617 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 HMOX2P30519 316 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 RPIAP49247 311 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 POLR2JP52435 117 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 YBX1P67809 324 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 GRAMD1BQ3KR37 738 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 Q6ZVL8 140 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 PKP2Q99959 881 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 GMPR2Q9P2T1 348 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 SUN2Q9UH99 717 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 IL36AQ9UHA7 158 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 SLC8A2Q9UPR5 921 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 PDE10AQ9Y233 779 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 TCRBV3S1A0A5B6 114 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 FAM234BA2RU67 622 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 NUAK1O60285 661 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 CAPNS1P04632 268 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 ANXA5P08758 320 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 MSH3P20585 1137 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 IL12AP29459 219 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 DGKGP49619 791 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 CREB5Q02930 508 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 HSPA14Q0VDF9 509 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 CAPRIN1Q14444 709 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 MAP7D1Q3KQU3 841 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 RARS2Q5T160 578 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 IL23RQ5VWK5 629 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 RNF165Q6ZSG1 346 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 DUS3LQ96G46 650 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 DUS2Q9NX74 493 aaKnown RBP19.73■□□□□ 0.75
USP39-204ENST00000409766 CMTM6Q9NX76 183 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 DPP7Q9UHL4 492 aa19.73■□□□□ 0.75
USP39-204ENST00000409766 CDH23Q9H251 3354 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 A6NHS1 94 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 CCDC154A6NI56 674 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 STK16O75716 305 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 RNASEH2AO75792 299 aaKnown RBP19.72■□□□□ 0.75
USP39-204ENST00000409766 SRPRAP08240 638 aaKnown RBP19.72■□□□□ 0.75
USP39-204ENST00000409766 ADH5P11766 374 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 HSD17B1P14061 328 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 EPB42P16452 691 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 AKT1P31749 480 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 GGT5P36269 586 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 ETV3P41162 512 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 TLR1Q15399 786 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 NR6A1Q15406 480 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 ZNF805Q5CZA5 627 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 TCEAL5Q5H9L2 206 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 RBM23Q86U06 439 aaKnown RBP19.72■□□□□ 0.75
USP39-204ENST00000409766 RSPRY1Q96DX4 576 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 LRIG1Q96JA1 1093 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 SLC12A9Q9BXP2 914 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 ARL15Q9NXU5 204 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 DKK3Q9UBP4 350 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 DTNAQ9Y4J8 743 aa19.72■□□□□ 0.75
USP39-204ENST00000409766 MTX2O75431 263 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ENO2P09104 434 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 EBLN1P0CF75 366 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 UQCRBP14927 111 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 CDKL1Q00532 357 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 AP5B1Q2VPB7 878 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 RFTN2Q52LD8 501 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 PAGE3Q5JUK9 113 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 HENMT1Q5T8I9 393 aaKnown RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 SERPINA13PQ6UXR4 307 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 CYP2R1Q6VVX0 501 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 UBE2R2Q712K3 238 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 C12orf40Q86WS4 652 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 DHFR2Q86XF0 187 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 TICAM1Q8IUC6 712 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 VRK3Q8IV63 474 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 TMEM102Q8N9M5 508 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 OSCP1Q8WVF1 389 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 ASB11Q8WXH4 323 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 DCUN1D1Q96GG9 259 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 TRIM54Q9BYV2 358 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 PARVBQ9HBI1 364 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 NFKBIL1Q9UBC1 381 aaPredicted RBP19.71■□□□□ 0.75
USP39-204ENST00000409766 TRPS1Q9UHF7 1281 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 RNF11Q9Y3C5 154 aa19.71■□□□□ 0.75
USP39-204ENST00000409766 AP4S1Q9Y587 144 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms