RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 VPS51Q9UID3 782 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 LSM7Q9UK45 103 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 BBIP1A8MTZ0 92 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 M0QZQ0 153 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 INPPL1O15357 1258 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF623O75123 536 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 SLC10A3P09131 477 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ATXN1LP0C7T5 689 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 FDXRP22570 491 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 EPHB3P54753 998 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 OR4D2P58180 307 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 BNIP3Q12983 259 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PMS2P3Q13401 168 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PRMT9Q6P2P2 845 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ABRAXAS1Q6UWZ7 409 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF621Q6ZSS3 439 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ERI1Q8IV48 349 aaKnown RBP13.17□□□□□ -0.3
COL6A2-204ENST00000409416 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ZBTB18Q99592 522 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 PARVBQ9HBI1 364 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 TMEM161AQ9NX61 479 aa13.17□□□□□ -0.3
COL6A2-204ENST00000409416 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PEX11BO96011 259 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 MTHFD2P13995 350 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HLA-DPA1P20036 260 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 STC1P52823 247 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ATP6V0D1P61421 351 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 MEF2AQ02078 507 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PRKG2Q13237 762 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 GLYATQ6IB77 296 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ADGRG5Q8IZF4 528 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ANKFN1Q8N957 763 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 TNIP2Q8NFZ5 429 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 SELENOMQ8WWX9 145 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 L3HYPDHQ96EM0 354 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 NSMCE3Q96MG7 304 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PRDM8Q9NQV8 689 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 SMPD3Q9NY59 655 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 TMA7Q9Y2S6 64 aaKnown RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 COQ6Q9Y2Z9 468 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 SPTBP11277 2137 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 FXYD1O00168 92 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ITGALP20701 1170 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PTGER1P34995 402 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ACADVLP49748 655 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 OCA2Q04671 838 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PHKG1Q16816 387 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 TCTN1Q2MV58 587 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 CRTC3Q6UUV7 619 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 UMODL1-AS1Q8N2C9 162 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 TRPV3Q8NET8 790 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 LKAAEAR1Q8TD35 194 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 DPY30Q9C005 99 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ELOVL6Q9H5J4 265 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 EPS8L2Q9H6S3 715 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ACTR3BQ9P1U1 418 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 OPTCQ9UBM4 332 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PDCD11Q14690 1871 aaKnown RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 J3QRK9 145 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HS6ST1O60243 411 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PRAMEF11O60813 436 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ESRRBO95718 433 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HIST1H2AGP0C0S8 130 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 BMP2P12643 396 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HLA-EP13747 358 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HIST1H2ADP20671 130 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PTNP21246 168 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 DNAJB1P25685 340 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 CYP4F2P78329 520 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PHEXP78562 749 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 BNIP2Q12982 314 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 GPR17Q13304 367 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 OR4F6Q8NGB9 312 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 FBXL8Q96CD0 374 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HIST1H2AHQ96KK5 128 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 HIST1H2AJQ99878 128 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 H2AFJQ9BTM1 129 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 IGFLR1Q9H665 355 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 TMEM248Q9NWD8 314 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 CNOT11Q9UKZ1 510 aaKnown RBP13.16□□□□□ -0.3
COL6A2-204ENST00000409416 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 PRSS21Q9Y6M0 314 aa13.16□□□□□ -0.3
COL6A2-204ENST00000409416 SZT2Q5T011 3432 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF840PA6NDX5 716 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 KCNH1O95259 989 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 ATE1O95260 518 aa13.15□□□□□ -0.3
COL6A2-204ENST00000409416 MAGP20916 626 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms