RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 KATNA1O75449 491 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 RFPL1O75677 317 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 FKBP9O95302 570 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 ZNF140P52738 457 aaPredicted RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 CTSCP53634 463 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 RRADP55042 308 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 PRAMEP78395 509 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 DNASE1L3Q13609 305 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 CLCA4Q14CN2 919 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 LACTB2Q53H82 288 aaPredicted RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 AFTPHQ6ULP2 937 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 DET1Q7L5Y6 550 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 KLHDC8BQ8IXV7 354 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 D2HGDHQ8N465 521 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 FERD3LQ96RJ6 166 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 DHRS4Q9BTZ2 278 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 TFB2MQ9H5Q4 396 aaKnown RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 INTS7Q9NVH2 962 aaKnown RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 OGFRQ9NZT2 677 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 SCHIP1Q9P0W5 487 aaPredicted RBP12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 PAK5Q9P286 719 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 ZNF148Q9UQR1 794 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 BTRCQ9Y297 605 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 PCDHGB7Q9Y5F8 929 aa12.54□□□□□ -0.4
SNORD88B-201ENST00000408454 IGLV3-16A0A075B6K0 115 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PIPSLA2A3N6 862 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 GSAPA4D1B5 854 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 GRID2IPA4D2P6 1211 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 F5H423 210 aaPredicted RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 ARHGAP6O43182 974 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 CREG1O75629 220 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 SCRG1O75711 98 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PRKAR1AP10644 381 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 CYP2A7P20853 494 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 TTPAP49638 278 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 CDK16Q00536 496 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 LINC00303Q3SY05 128 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 KHDC1Q4VXA5 237 aaKnown RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 C16orf46Q6P387 395 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PACS1Q6VY07 963 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PPHLN1Q8NEY8 458 aaKnown RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 MAGEC3Q8TD91 643 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 ASZ1Q8WWH4 475 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PANX3Q96QZ0 392 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 TWSG1Q9GZX9 223 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 LHX9Q9NQ69 397 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 OR6C2Q9NZP2 312 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 SRPK3Q9UPE1 567 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 PCYT1BQ9Y5K3 369 aaPredicted RBP12.53□□□□□ -0.4
SNORD88B-201ENST00000408454 BPTFQ12830 3046 aa12.52□□□□□ -0.4
SNORD88B-201ENST00000408454 BAHCC1Q9P281 2608 aa12.52□□□□□ -0.4
SNORD88B-201ENST00000408454 TRBV5-4A0A0C4DH59 114 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 LOC101059948A0A1B0GTJ6 334 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 OR6C74A6NCV1 312 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 SUV39H1O43463 412 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 APOA4P06727 396 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 POLBP06746 335 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 RAB40ALP0C0E4 278 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 CCDC175P0C221 793 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 PIM1P11309 404 aaPredicted RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 ADRA1DP25100 572 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 PREPP48147 710 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 LEPRP48357 1165 aaKnown RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 XIAPP98170 497 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 KLRB1Q12918 225 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 RPS6KA1Q15418 735 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 FASTKD1Q53R41 847 aaKnown RBP12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TCTN3Q6NUS6 607 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 SERPINA9Q86WD7 417 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 LRRC6Q86X45 466 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 RAB43Q86YS6 212 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 EXD3Q8N9H8 876 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TEX19Q8NA77 164 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TRIM58Q8NG06 486 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 SLC35B2Q8TB61 432 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 CLIP3Q96DZ5 547 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 TCTN2Q96GX1 697 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 CDKN2AIPNLQ96HQ2 116 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 SGSM3Q96HU1 749 aa12.52□□□□□ -0.41
SNORD88B-201ENST00000408454 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms