RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RNF38Q9H0F5 515 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 INTS10Q9NVR2 710 aaKnown RBP12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 PCDHA9Q9Y5H5 950 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 SHMT2P34897 504 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ARSFP54793 590 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 COL9A2Q14055 689 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 RGMBQ6NW40 437 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 HM13Q8TCT9 377 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 SLC13A3Q8WWT9 602 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 GLMNQ92990 594 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 BIRC8Q96P09 236 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ZFYVE1Q9HBF4 777 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 VPS9D1Q9Y2B5 631 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 SBF1O95248 1867 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 SMAD6O43541 496 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CLDN11O75508 207 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CCNA2P20248 432 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 FMO3P31513 532 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 GALNT1Q10472 559 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 RCAN2Q14206 197 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ANKRD26P1Q6NSI1 321 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 LRRC8DQ7L1W4 858 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PIWIL3Q7Z3Z3 882 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 LKAAEAR1Q8TD35 194 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 GPATCH1Q9BRR8 931 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PLGRKTQ9HBL7 147 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 KIF17Q9P2E2 1029 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 MED16Q9Y2X0 877 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PLXNA1Q9UIW2 1896 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 RASAL1O95294 804 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 OTCP00480 354 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PRLP01236 227 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CYBAP13498 195 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 HRH2P25021 359 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PBLDP30039 288 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 S100A3P33764 101 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 SLC26A3P40879 764 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CSKP41240 450 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ZNF140P52738 457 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 RAD23AP54725 363 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CDH4P55283 916 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 OCA2Q04671 838 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 MGAT3Q09327 533 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 MYBPC3Q14896 1274 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 NR1D2Q14995 579 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 CYBRD1Q53TN4 286 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ZCCHC8Q6NZY4 707 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 NPLQ9BXD5 320 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 TBC1D30Q9Y2I9 924 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 Q9Y3F1 56 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 PRSS21Q9Y6M0 314 aa12.45□□□□□ -0.42
PPP4R1-202ENST00000400555 SERPINA1P01009 418 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 EPB42P16452 691 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 ATF6P18850 670 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 DSC3Q14574 896 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 CHRNA6Q15825 494 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 ATP6AP1Q15904 470 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 FAM43BQ6ZT52 329 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 EGFL6Q8IUX8 553 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 PHYKPLQ8IUZ5 450 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 FEM1AQ9BSK4 669 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 LRTM1Q9HBL6 345 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 PRDM8Q9NQV8 689 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 CNOT11Q9UKZ1 510 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 OTOFQ9HC10 1997 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 H3BMQ9 156 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 RGS14O43566 566 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 RPS17P08708 135 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 OCM2P0CE71 109 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 DGKEP52429 567 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 TXNDC11Q6PKC3 985 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 ADAMTSL2Q86TH1 951 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 TSPAN33Q86UF1 283 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 TEX26Q8N6G2 289 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 ATG16L2Q8NAA4 619 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 CNIH3Q8TBE1 160 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 COG8Q96MW5 612 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 SEZ6LQ9BYH1 1024 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 EPB41L1Q9H4G0 881 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 LMCD1Q9NZU5 365 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 WASH4PA8MWX3 477 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 E2F3O00716 465 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 SH3BP5O60239 455 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 MATN1P21941 496 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 MYF6P23409 242 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 GNPDA1P46926 289 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 ATP4BP51164 291 aa12.44□□□□□ -0.42
PPP4R1-202ENST00000400555 CYP4F3Q08477 520 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms