RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ADNPQ9H2P0 1102 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 HIPK3Q9H422 1215 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 CFAP97Q9P2B7 532 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 TBC1D4O60343 1298 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 TNFAIP8O95379 198 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 STATHP02808 62 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ENTPD1P49961 510 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ZNF33AQ06730 810 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 LSAMPQ13449 338 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ATP6AP1LQ52LC2 224 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ALPK2Q86TB3 2170 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 SEC22BO75396 215 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ZDHHC11BP0C7U3 371 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 PREPP48147 710 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
ITSN1-211ENST00000399355 MEF2AQ02078 507 aaPredicted RBP11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ACVR1Q04771 509 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 RCAN2Q14206 197 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 NCLNQ969V3 563 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 RMND5BQ96G75 393 aaPredicted RBP11.53□□□□□ -0.56
ITSN1-211ENST00000399355 GPRC5BQ9NZH0 403 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 TRPM5Q9NZQ8 1165 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
ITSN1-211ENST00000399355 ASCC3Q8N3C0 2202 aaKnown RBP11.52□□□□□ -0.56
ITSN1-211ENST00000399355 ZNF821O75541 412 aaPredicted RBP11.52□□□□□ -0.56
ITSN1-211ENST00000399355 SPIDRQ14159 915 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 TAF1AQ15573 450 aaPredicted RBP11.52□□□□□ -0.56
ITSN1-211ENST00000399355 LRRC66Q68CR7 880 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 DLEU7Q6UYE1 221 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 ERMP1Q7Z2K6 904 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 TMEM25Q86YD3 366 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 RGL4Q8IZJ4 473 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 MAL2Q969L2 176 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 DERL2Q9GZP9 239 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 NTN4Q9HB63 628 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 AIG1Q9NVV5 245 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 WWOXQ9NZC7 414 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.52□□□□□ -0.56
ITSN1-211ENST00000399355 LIMD1Q9UGP4 676 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 TRIM17Q9Y577 477 aa11.52□□□□□ -0.56
ITSN1-211ENST00000399355 A0A1B0GVM2 712 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 A0A1W2PP18 115 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 H0Y858 1186 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 LSM1O15116 133 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CCL16O15467 120 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 XPNPEP2O43895 674 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CDK4P11802 303 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 PSMA4P25789 261 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 B4GALNT1Q00973 533 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 LMAN2Q12907 356 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TMED1Q13445 227 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 LAMB3Q13751 1172 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 SMN1Q16637 294 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 AFTPHQ6ULP2 937 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 MSRB3Q8IXL7 192 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 PCYOX1LQ8NBM8 494 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 PIH1D2Q8WWB5 315 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 SDCCAG3Q96C92 435 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 BTBD9Q96Q07 612 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 ZFYVE1Q9HBF4 777 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 AMBNQ9NP70 447 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 IL37Q9NZH6 218 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CRLS1Q9UJA2 301 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 ZNF490Q9ULM2 529 aaPredicted RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 COQ6Q9Y2Z9 468 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TEX28O15482 410 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CLOCKO15516 846 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 H6PDO95479 791 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 NTRK1P04629 796 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 ACPPP15309 386 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 HLA-FP30511 346 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CDH4P55283 916 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TLE2Q04725 743 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TRAF3Q13114 568 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 MEP1AQ16819 746 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 SPESP1Q6UW49 350 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 PIWIL3Q7Z3Z3 882 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 RBM23Q86U06 439 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CACTIN-AS1Q8N1I8 211 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 PBXIP1Q96AQ6 731 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 ZFYVE19Q96K21 471 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 OSBPL11Q9BXB4 747 aa11.52□□□□□ -0.57
ITSN1-211ENST00000399355 TFB2MQ9H5Q4 396 aaKnown RBP11.52□□□□□ -0.57
ITSN1-211ENST00000399355 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms