RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 MIR1-1HGQ9H1L0 117 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 NTN4Q9HB63 628 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 RC3H2Q9HBD1 1191 aaKnown RBP9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 EML4Q9HC35 981 aaKnown RBP9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 ANKHQ9HCJ1 492 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 PIGVQ9NUD9 493 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 GIMAP4Q9NUV9 329 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 FAM118AQ9NWS6 357 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 PAK1IP1Q9NWT1 392 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 NPAP1Q9NZP6 1156 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 KIAA1257Q9ULG3 409 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 VANGL2Q9ULK5 521 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 PCDHA9Q9Y5H5 950 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 V9GYQ6 96 aa9.99□□□□□ -0.81
HMGCLL1-205ENST00000398661 MYO18AQ92614 2054 aaKnown RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 MTMR11A4FU01 709 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CENPXA8MT69 81 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 FAM72CH0Y354 149 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 M0QYT0 321 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SLC1A7O00341 560 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 MTSS1O43312 755 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 USP12O75317 370 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 FGF18O76093 207 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 NDST3O95803 873 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CA3P07451 260 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ALDOCP09972 364 aaKnown RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 TCF3P15923 654 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 GJA1P17302 382 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ATF6P18850 670 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CAPN3P20807 821 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 IL12AP29459 219 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SDC4P31431 198 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 PPP2R2BQ00005 443 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CD47Q08722 323 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ZNF460Q14592 562 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ACOX1Q15067 660 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 NPTX1Q15818 432 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 DPYSL2Q16555 572 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SPATS1Q496A3 300 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ZFP69Q49AA0 526 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 FAM72AQ5TYM5 149 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 OTUD1Q5VV17 481 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LAIR2Q6ISS4 152 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 FAM72DQ6L9T8 149 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ZNF544Q6NX49 715 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LARP4Q71RC2 724 aaKnown RBP eCLIP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SPATC1Q76KD6 591 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CUZD1Q86UP6 607 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 STK32CQ86UX6 486 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 FAM72BQ86X60 149 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 PTRH1Q86Y79 214 aaKnown RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ESX1Q8N693 406 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ZNF555Q8NEP9 628 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BPIFB1Q8TDL5 484 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 RORBQ92753 470 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 TMBIM1Q969X1 311 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SDCCAG3Q96C92 435 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BIRC7Q96CA5 298 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LRRC58Q96CX6 371 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 P2RY11Q96G91 374 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 RNF145Q96MT1 663 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 UROC1Q96N76 676 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CSPG4P5Q96PW8 444 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 COQ7Q99807 217 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 RHOJQ9H4E5 214 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SLA2Q9H6Q3 261 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LTB4R2Q9NPC1 389 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BFARQ9NZS9 450 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 MAGED1Q9Y5V3 778 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ATP6AP2A0A1C7CYW4 349 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 A0A1W2PQH9 124 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 NEMP2A6NFY4 417 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 PDZK1P1A8MUH7 402 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 UPK1AO00322 258 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ATP6AP2O75787 350 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 MOCS2O96007 188 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ATP5F1P24539 256 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SOX11P35716 441 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 CDONQ4KMG0 1287 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BRMS1LQ5PSV4 323 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 BEND5Q7L4P6 421 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 GDPD3Q7L5L3 318 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 GATAD2AQ86YP4 633 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 PLD3Q8IV08 490 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 SLC22A15Q8IZD6 547 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 METTL4Q8N3J2 472 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 LSMEM1Q8N8F7 131 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 RMDN1Q96DB5 314 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 KCTD15Q96SI1 283 aaPredicted RBP9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 MBOAT4Q96T53 435 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 ALG2Q9H553 416 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 STMN3Q9NZ72 180 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 OSGIN1Q9UJX0 560 aa9.98□□□□□ -0.81
HMGCLL1-205ENST00000398661 TSC2P49815 1807 aa9.97□□□□□ -0.81
HMGCLL1-205ENST00000398661 PABPN1LA6NDY0 278 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms