RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 CPNE7Q9UBL6 633 aa16.98■□□□□ 0.31
CSNK1D-204ENST00000398519 CORO1CQ9ULV4 474 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-204ENST00000398519 CFAP20Q9Y6A4 193 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-204ENST00000398519 GOLGA4Q13439 2230 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PRAMEF33A0A0G2JMD5 474 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 KPNA5O15131 536 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PPM1DO15297 605 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 RIPK2O43353 540 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 SLCO2B1O94956 709 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 GP5P40197 560 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 CDKN2DP55273 166 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 SIM1P81133 766 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PLOD1Q02809 727 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 HHEXQ03014 270 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 NAB1Q13506 487 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 TMED2Q15363 201 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PERM1Q5SV97 790 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 DUS1LQ6P1R4 473 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 SLC9B2Q86UD5 537 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PDZD3Q86UT5 571 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 SLC22A15Q8IZD6 547 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 ZBTB2Q8N680 514 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 ACVR1CQ8NER5 493 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 CD200R1Q8TD46 325 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 NAT6Q93015 286 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 CCDC74AQ96AQ1 378 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 C12orf66Q96MD2 445 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 CYTH2Q99418 400 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 GPR21Q99679 349 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 RBBP8Q99708 897 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 EPB41L4BQ9H329 900 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 IMP3Q9NV31 184 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 TXNDC16Q9P2K2 825 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 LRIT1Q9P2V4 623 aa16.97■□□□□ 0.31
CSNK1D-204ENST00000398519 PCNX2A6NKB5 2137 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 VPS26AO75436 327 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 FAM155BO75949 473 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 ABHD2P08910 425 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 MTHFD1P11586 935 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 GBX1Q14549 363 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 PUM1Q14671 1186 aaKnown RBP eCLIP16.96■□□□□ 0.316e-6■■□□□ 13.7
CSNK1D-204ENST00000398519 PLEKHS1Q5SXH7 462 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 HECTD2Q5U5R9 776 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 FAM45BPQ6NSW5 357 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 ZNF438Q7Z4V0 828 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 PIM3Q86V86 326 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 OR6C4Q8NGE1 309 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 FAM45AQ8TCE6 357 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 CXorf40BQ96DE9 158 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 VPS39Q96JC1 886 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 OLFM1Q99784 485 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 POT1Q9NUX5 634 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 RAB21Q9UL25 225 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 SPTBN4Q9H254 2564 aa16.96■□□□□ 0.31
CSNK1D-204ENST00000398519 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 FAM95CA0A1B0GW59 222 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 IFRD1O00458 451 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 VIPP01282 170 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 GP1BAP07359 652 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 FTH1P19P0C7X4 201 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 FDXRP22570 491 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 MCM3P25205 808 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 ACADLP28330 430 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 PGGT1BP53609 377 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 SLCO6A1Q86UG4 719 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 ZNF761Q86XN6 746 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 TRIM48Q8IWZ4 208 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 AVL9Q8NBF6 648 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 AENQ8WTP8 325 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 ELMO2Q96JJ3 720 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 SLC40A1Q9NP59 571 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 TAS2R13Q9NYV9 303 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 KLHL42Q9P2K6 505 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 VWA7Q9Y334 891 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 DHRS7Q9Y394 339 aa16.95■□□□□ 0.3
CSNK1D-204ENST00000398519 RHPN2P1A8MT19 583 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 CASC3O15234 703 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 RFPL3O75679 317 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 DKK1O94907 266 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 PNLIPP16233 465 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 CD9P21926 228 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 LIMK2P53671 638 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 BIRC2Q13490 618 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 NR1D2Q14995 579 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 CCDC157Q569K6 752 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 ACSBG2Q5FVE4 666 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 GRTP1Q5TC63 336 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 TFGQ92734 400 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 MRRFQ96E11 262 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 CCDC3Q9BQI4 270 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 STN1Q9H668 368 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 TRMT6Q9UJA5 497 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 MTO1Q9Y2Z2 717 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 PCDHGA1Q9Y5H4 931 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 CNOT1A5YKK6 2376 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 KCNA4P22459 653 aa16.94■□□□□ 0.3
CSNK1D-204ENST00000398519 ATP5DP30049 168 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms