RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ADPGKQ9BRR6 497 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 NUP85Q9BW27 656 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 SLA2Q9H6Q3 261 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 UBTD1Q9HAC8 227 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 HHATLQ9HCP6 504 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 KLHL9Q9P2J3 617 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 YIPF1Q9Y548 306 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 CGNL1Q0VF96 1302 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 A0A1W2PPQ1 181 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 ANKUB1A6NFN9 424 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 C15orf62A8K5M9 175 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PRR32B1ATL7 298 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PLK4O00444 970 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 ZBTB43O43298 467 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 GPR137BO60478 399 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TSPAN1O60635 241 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TBCAO75347 108 aaKnown RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 SLCO2B1O94956 709 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 OR2T7P0C7T2 308 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 FGF3P11487 239 aaPredicted RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 ARCN1P48444 511 aaKnown RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 IRX6P78412 446 aaPredicted RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 SLC20A2Q08357 652 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 ILF3Q12906 894 aaKnown RBP eCLIP2.63□□□□□ -1.99
CD47-203ENST00000398258 PPIGQ13427 754 aaKnown RBP eCLIP2.63□□□□□ -1.99
CD47-203ENST00000398258 ZNF273Q14593 569 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 VWC2Q2TAL6 325 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 CCDC184Q52MB2 194 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 GCNT6Q5T4J0 391 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 RNASEH2BQ5TBB1 312 aaKnown RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 PLA2G4FQ68DD2 849 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PRR27Q6MZM9 219 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 DCLRE1AQ6PJP8 1040 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PRSS57Q6UWY2 283 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.63□□□□□ -1.995e-7■■■■□ 21.8
CD47-203ENST00000398258 PLEKHM3Q6ZWE6 761 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TMEM173Q86WV6 379 aaPredicted RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 THNSL1Q8IYQ7 743 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 FBXO39Q8N4B4 442 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 OR52I2Q8NH67 350 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 LMO3Q8TAP4 145 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TEKT4Q8WW24 435 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 FIG4Q92562 907 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 BICD1Q96G01 975 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TMEM19Q96HH6 336 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PRMT6Q96LA8 375 aaPredicted RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 BTBD10Q9BSF8 475 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 GOLPH3LQ9H4A5 285 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 C6orf106Q9H6K1 298 aaPredicted RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 OPA3Q9H6K4 179 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 DDX31Q9H8H2 851 aaKnown RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 CNOT10Q9H9A5 744 aaKnown RBP2.63□□□□□ -1.99
CD47-203ENST00000398258 CD93Q9NPY3 652 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TCP11L1Q9NUJ3 509 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 GRIP1Q9Y3R0 1128 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 PCDHGB1Q9Y5G3 927 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 LIPGQ9Y5X9 500 aa2.63□□□□□ -1.99
CD47-203ENST00000398258 TRIM77I1YAP6 450 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 SLC16A5O15375 505 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ZNHIT1O43257 154 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 WDR1O75083 606 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 CELF2O95319 508 aaKnown RBP2.62□□□□□ -1.99
CD47-203ENST00000398258 GCNT3O95395 438 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ERCC2P18074 760 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ACHEP22303 614 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 PCGF2P35227 344 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 KRT2P35908 639 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 GP5P40197 560 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 MTHFRP42898 656 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ART1P52961 327 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 RBP5P82980 135 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 COG7P83436 770 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 RELQ04864 619 aaPredicted RBP2.62□□□□□ -1.99
CD47-203ENST00000398258 BFSP1Q12934 665 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 HSPB3Q12988 150 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 GTF2H2Q13888 395 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 SLC39A14Q15043 492 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 LETM2Q2VYF4 491 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 TMEM35AQ53FP2 167 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 C6orf136Q5SQH8 315 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 C1QTNF12Q5T7M4 302 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 C9orf57Q5W0N0 161 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ALS2CLQ60I27 953 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 GTF2H2CQ6P1K8 395 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 TRAT1Q6PIZ9 186 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 SUSD1Q6UWL2 747 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 C16orf82Q7Z2V1 217 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 DGLUCYQ7Z3D6 616 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 ARMC9Q7Z3E5 817 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 GALNTL5Q7Z4T8 443 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 CENPVQ7Z7K6 275 aaPredicted RBP2.62□□□□□ -1.99
CD47-203ENST00000398258 KMT5CQ86Y97 462 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.62□□□□□ -1.99
CD47-203ENST00000398258 CEP57L1Q8IYX8 460 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 MUC20Q8N307 709 aaPredicted RBP2.62□□□□□ -1.99
CD47-203ENST00000398258 KIF18AQ8NI77 898 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 PPP4R1Q8TF05 950 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 FAM162AQ96A26 154 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 SLAMF9Q96A28 289 aa2.62□□□□□ -1.99
CD47-203ENST00000398258 PHF21AQ96BD5 680 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms