RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 MCCP23508 829 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 PCGF2P35227 344 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 MTHFRP42898 656 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 CCR10P46092 362 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 ARCN1P48444 511 aaKnown RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 MMP15P51511 669 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 ZNF75DP51815 510 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 MLLT10P55197 1068 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 KEAP1Q14145 624 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 KIR2DS5Q14953 304 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 TNIP1Q15025 636 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 SLC39A14Q15043 492 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 HYAL4Q2M3T9 481 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 STXBP5Q5T5C0 1151 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 NADSYN1Q6IA69 706 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 KLC3Q6P597 504 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 FAM171BQ6P995 826 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 PLXDC2Q6UX71 529 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 TMPRSS11FQ6ZWK6 438 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 ANKRD23Q86SG2 305 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 PTOV1Q86YD1 416 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 CTAGE4Q8IX94 777 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 CEP57L1Q8IYX8 460 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 SAMD14Q8IZD0 417 aaPredicted RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 MUC20Q8N307 709 aaPredicted RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 ATL1Q8WXF7 558 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 DAZLQ92904 295 aaKnown RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 SLAMF9Q96A28 289 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 LINGO1Q96FE5 620 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 OXNAD1Q96HP4 312 aaPredicted RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 MARK4Q96L34 752 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 SLX1AQ9BQ83 275 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 FNDC11Q9BVV2 318 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 FAM129AQ9BZQ8 928 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 DDX31Q9H8H2 851 aaKnown RBP2.98□□□□□ -1.93
PTPRC-205ENST00000391970 TRPC7Q9HCX4 862 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 SLC24A2Q9UI40 661 aa2.98□□□□□ -1.93
PTPRC-205ENST00000391970 PLSCR5A0PG75 271 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 CCDC188H7C350 402 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TULP2O00295 520 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 PTGESO14684 152 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SLC28A2O43868 658 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TFAP2AP05549 437 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LIPFP07098 398 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 KRT19P08727 400 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 RAB40ALP0C0E4 278 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 FDPSP14324 419 aaKnown RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 CSF2RAP15509 400 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 IFNAR1P17181 557 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 ACHEP22303 614 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 PSMC4P43686 418 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 NPY4RP50391 375 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 FUT6P51993 359 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LIMK1P53667 647 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 PRKAA1Q13131 559 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SCARB2Q14108 478 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 ALDH1L2Q3SY69 923 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 NDUFAF5Q5TEU4 345 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 IRAK1BP1Q5VVH5 260 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 PLA2G4FQ68DD2 849 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 KRT39Q6A163 491 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TRAT1Q6PIZ9 186 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SUSD1Q6UWL2 747 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 UNQ6126/PRO20091Q6UXV3 157 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 PACS1Q6VY07 963 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 FAM47EQ6ZV65 393 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TUBA1AQ71U36 451 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 ERN2Q76MJ5 926 aaKnown RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 DGLUCYQ7Z3D6 616 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 GALNTL5Q7Z4T8 443 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LONP2Q86WA8 852 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 ZDHHC17Q8IUH5 632 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TTC30BQ8N4P2 665 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 L3MBTL4Q8NA19 623 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 CAMKVQ8NCB2 501 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 RDM1Q8NG50 284 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 NUDCD2Q8WVJ2 157 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SORCS1Q8WY21 1168 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SIPA1Q96FS4 1042 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 ABHD8Q96I13 439 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 THOC3Q96J01 351 aaKnown RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SPATA17Q96L03 361 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LRRC3BQ96PB8 259 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 IL17FQ96PD4 163 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 RAB3IPQ96QF0 476 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 SEPHS2Q99611 448 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 MEIS3Q99687 375 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 TUBA1CQ9BQE3 449 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 BTBD10Q9BSF8 475 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 WACQ9BTA9 647 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LMF2Q9BU23 707 aaKnown RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 HIPK2Q9H2X6 1198 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 C6orf106Q9H6K1 298 aaPredicted RBP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 FKRPQ9H9S5 495 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 DPP3Q9NY33 737 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 POU2F3Q9UKI9 436 aa2.97□□□□□ -1.93
PTPRC-205ENST00000391970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.97□□□□□ -1.93
PTPRC-205ENST00000391970 LIPGQ9Y5X9 500 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms