RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CHTOPQ9Y3Y2 248 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
TRAV35-201ENST00000390462 RGPD1P0DJD0 1748 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 DCCP43146 1447 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 CEP162Q5TB80 1403 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM131LA2VDJ0 1609 aa6.32□□□□□ -1.4
TRAV35-201ENST00000390462 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 DUOX2Q9NRD8 1548 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TNS1Q9HBL0 1735 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 MAGEA13PA6NCF6 341 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 E9PBE3 544 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 EBAG9O00559 213 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 PRYO14603 147 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 PTGESO14684 152 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CTDSPLO15194 276 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 KIF1CO43896 1103 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 MFAP3LO75121 409 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 GH2P01242 217 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CYP1A1P04798 512 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 PGK2P07205 417 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CHRM2P08172 466 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CYP2A7P20853 494 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 GMPSP49915 693 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 VCPP55072 806 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 MTTPP55157 894 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 SORDQ00796 357 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TSTA3Q13630 321 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ERCC6LQ2NKX8 1250 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 SPOUT1Q5T280 376 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 DENND2CQ68D51 928 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 KCTD11Q693B1 232 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 FBXO42Q6P3S6 717 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CUZD1Q86UP6 607 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM173Q86WV6 379 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 DTX1Q86Y01 620 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 KLBQ86Z14 1044 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 SPATA2LQ8IUW3 424 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM151BQ8IW70 566 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ELOA2Q8IYF1 753 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 BBS5Q8N3I7 341 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 RASGEF1AQ8N9B8 481 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 DRAXINQ8NBI3 349 aaPredicted RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 HUS1BQ8NHY5 278 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 SELENOMQ8WWX9 145 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 IP6K1Q92551 441 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 FIG4Q92562 907 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 SLITRK1Q96PX8 696 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 FRG2BQ96QU4 278 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ZBTB18Q99592 522 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 OLFM1Q99784 485 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 MXRA8Q9BRK3 442 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM79Q9BSE2 394 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 GTPBP2Q9BX10 602 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
TRAV35-201ENST00000390462 TMEM184CQ9NVA4 438 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 KCNE5Q9UJ90 142 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ADAMTS6Q9UKP5 1117 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 FZD4Q9ULV1 537 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 EXOC6BQ9Y2D4 811 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CLIC4Q9Y696 253 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 PTCH1Q13635 1447 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 NCAPD2Q15021 1401 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 ADAMTS13Q76LX8 1427 aa6.31□□□□□ -1.4
TRAV35-201ENST00000390462 CPED1A4D0V7 1026 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 KBTBD13C9JR72 458 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 LEFTY2O00292 366 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 FCGR3BO75015 233 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ATG13O75143 517 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ZNF202O95125 648 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 VNN2O95498 520 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 PLGP00747 810 aaPredicted RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 PLA2G4BP0C869 781 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SPINK2P20155 84 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 GALP22466 123 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 PSMB4P28070 264 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SLC6A6P31641 620 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 CYP2C18P33260 490 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 ETV1P50549 477 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 CDR1P51861 262 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 HNRNPFP52597 415 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 WDR5P61964 334 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 PPP2R2BQ00005 443 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SLC18A2Q05940 514 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SPOCK1Q08629 439 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SNTB2Q13425 540 aaKnown RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 CCDC152Q4G0S7 254 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 LRRC73Q5JTD7 316 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 VWA5B1Q5TIE3 1220 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 HIST2H2BCQ6DN03 193 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 HIST2H2BDQ6DRA6 164 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 WBP2NLQ6ICG8 309 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 SULT1C3Q6IMI6 304 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 FBXO46Q6PJ61 603 aaPredicted RBP6.3□□□□□ -1.4
TRAV35-201ENST00000390462 NOXA1Q86UR1 476 aa6.3□□□□□ -1.4
TRAV35-201ENST00000390462 CIR1Q86X95 450 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms