RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ITM2BQ9Y287 266 aa24.72■■□□□ 1.55
SHOX2-201ENST00000389589 PABPN1LA6NDY0 278 aaKnown RBP24.71■■□□□ 1.55
SHOX2-201ENST00000389589 SGTAO43765 313 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 FKBP6O75344 327 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 MRPL19P49406 292 aaKnown RBP24.71■■□□□ 1.55
SHOX2-201ENST00000389589 ZNF765Q7L2R6 523 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 MILR1Q7Z6M3 343 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 OR4F6Q8NGB9 312 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 ELMO1Q92556 727 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 JADE3Q92613 823 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 PDE10AQ9Y233 779 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 POMPQ9Y244 141 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 AREL1O15033 823 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 SPINT1O43278 529 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 MATN4O95460 622 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 CAPN1P07384 714 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 HIST1H2AGP0C0S8 130 aaPredicted RBP24.71■■□□□ 1.55
SHOX2-201ENST00000389589 ADRB3P13945 408 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 HIST1H2ADP20671 130 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 GRIK2Q13002 908 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 TRAF3Q13114 568 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 GRM2Q14416 872 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 HPS6Q86YV9 775 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 ELSPBP1Q96BH3 223 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 HIST1H2AHQ96KK5 128 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 CDK15Q96Q40 435 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 HIST1H2AJQ99878 128 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 H2AFJQ9BTM1 129 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 PLA2G2FQ9BZM2 168 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 SDR39U1Q9NRG7 319 aaPredicted RBP24.71■■□□□ 1.55
SHOX2-201ENST00000389589 ARL15Q9NXU5 204 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 GIMAP2Q9UG22 337 aa24.71■■□□□ 1.55
SHOX2-201ENST00000389589 BBIP1A8MTZ0 92 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 C1QTNF3-AMACRE9PGA6 284 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 STK16O75716 305 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 GGT5P36269 586 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 METAP1P53582 386 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 RPS6KA2Q15349 733 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 REP15Q6BDI9 236 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 AAGABQ6PD74 315 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 PAOXQ6QHF9 649 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 NUDT18Q6ZVK8 323 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 SFTPA1Q8IWL2 248 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 SKA2Q8WVK7 121 aaPredicted RBP24.7■■□□□ 1.54
SHOX2-201ENST00000389589 MYADMQ96S97 322 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 CDRT15Q96T59 188 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 ACOX2Q99424 681 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 KAT7O95251 611 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 EPB42P16452 691 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 CYP2A7P20853 494 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 GCKP35557 465 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 HNMTP50135 292 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 SLC34A1Q06495 639 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 CES5AQ6NT32 575 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 NTMT1Q9BV86 223 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 CACNA2D2Q9NY47 1150 aa24.7■■□□□ 1.54
SHOX2-201ENST00000389589 GFYI3L273 518 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 NRP2O60462 931 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 HMOX2P30519 316 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 GRIA2P42262 883 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 IL12RB1P42701 662 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 AP2B1P63010 937 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 LRP8Q14114 963 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 TMEM52BQ4KMG9 183 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 HACD2Q6Y1H2 254 aa24.69■■□□□ 1.54
SHOX2-201ENST00000389589 ERN2Q76MJ5 926 aaKnown RBP24.69■■□□□ 1.54
SHOX2-201ENST00000389589 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.69■■□□□ 1.54
SHOX2-201ENST00000389589 CCDC124Q96CT7 223 aaKnown RBP24.69■■□□□ 1.54
SHOX2-201ENST00000389589 FBP2O00757 339 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 ATG13O75143 517 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 KATNA1O75449 491 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 SLCO2B1O94956 709 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 ERVK-8P63133 956 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 CREB5Q02930 508 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 TMEM115Q12893 351 aaPredicted RBP24.68■■□□□ 1.54
SHOX2-201ENST00000389589 PIGGQ5H8A4 983 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 NAIF1Q69YI7 327 aaPredicted RBP24.68■■□□□ 1.54
SHOX2-201ENST00000389589 RNF165Q6ZSG1 346 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 VRK3Q8IV63 474 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 FUNDC1Q8IVP5 155 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 DCBLD1Q8N8Z6 715 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 OR9I1Q8NGQ6 314 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 KXD1Q9BQD3 176 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 EPHX3Q9H6B9 360 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 ANGPTL2Q9UKU9 493 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 GPR45Q9Y5Y3 372 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 OR2AG2A6NM03 316 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 CFLARO15519 480 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 EBLN1P0CF75 366 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 PRLHRP49683 370 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 AP1S2P56377 157 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 ATP6AP1LQ52LC2 224 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 RASGEF1AQ8N9B8 481 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 MCOLN3Q8TDD5 553 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 RAB7BQ96AH8 199 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 NUS1Q96E22 293 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 GDF15Q99988 308 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 HDAC8Q9BY41 377 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 SLC32A1Q9H598 525 aa24.68■■□□□ 1.54
SHOX2-201ENST00000389589 MRPL40Q9NQ50 206 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms