RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C12orf66Q96MD2 445 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 KCNK4Q9NYG8 393 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 ASXL3Q9C0F0 2248 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 FAM221BA6H8Z2 402 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 IQCF5A8MTL0 148 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 E5RI56 91 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 B4GAT1O43505 415 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 SLCO2B1O94956 709 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 AHSGP02765 367 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 ITGB6P18564 788 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 CHRM3P20309 590 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 PDHA2P29803 388 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 ALDH4A1P30038 563 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 SSTR1P30872 391 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 PREPP48147 710 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 OR1D5P58170 312 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 CCL7P80098 99 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 FOXC1Q12948 553 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 SPIDRQ14159 915 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 HES3Q5TGS1 186 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 RBM44Q6ZP01 1051 aaKnown RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 SLC22A15Q8IZD6 547 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 CHCHD4Q8N4Q1 142 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 EIF1ADQ8N9N8 165 aaKnown RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 OR10G6Q8NH81 332 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 LKAAEAR1Q8TD35 194 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 C9orf72Q96LT7 481 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 GFM1Q96RP9 751 aaKnown RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 RHOXF2Q9BQY4 288 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 MVB12BQ9H7P6 319 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
CKAP2-202ENST00000378034 CLCA2Q9UQC9 943 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 RP1P56715 2156 aa12.94□□□□□ -0.34
CKAP2-202ENST00000378034 PTPRBP23467 1997 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 IGHV1OR21-1A0A087WYE8 117 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 NIPSNAP2O75323 286 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 MT-CO3P00414 261 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 CD9P21926 228 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 ACADLP28330 430 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 ATP5DP30049 168 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 ECHS1P30084 290 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 STX2P32856 288 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 GPX6P59796 221 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 FOXK2Q01167 660 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 HSPA14Q0VDF9 509 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 CNSTQ6PJW8 725 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 DCBLD1Q8N8Z6 715 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
CKAP2-202ENST00000378034 TFGQ92734 400 aaPredicted RBP12.93□□□□□ -0.34
CKAP2-202ENST00000378034 DEPDC7Q96QD5 511 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 AARSD1Q9BTE6 412 aaKnown RBP12.93□□□□□ -0.34
CKAP2-202ENST00000378034 LRRC4CQ9HCJ2 640 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 WASF3Q9UPY6 502 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 CDYLQ9Y232 598 aa12.93□□□□□ -0.34
CKAP2-202ENST00000378034 A0A1W2PQM1 296 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 DUX1O43812 170 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 CPNE6O95741 557 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 JUPP14923 745 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 GABRB3P28472 473 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 CD1CP29017 333 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 SHC2P98077 582 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 KRT33BQ14525 404 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 SLMAPQ14BN4 828 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 BRD3Q15059 726 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 TTLL9Q3SXZ7 439 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 UGT3A1Q6NUS8 523 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 ZNF549Q6P9A3 640 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 AHCYL2Q96HN2 611 aaKnown RBP12.92□□□□□ -0.34
CKAP2-202ENST00000378034 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 NEUROG3Q9Y4Z2 214 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 FAM159BA6NKW6 160 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 HYAL3O43820 417 aaPredicted RBP12.92□□□□□ -0.34
CKAP2-202ENST00000378034 VPS26AO75436 327 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 SLU7O95391 586 aaKnown RBP12.92□□□□□ -0.34
CKAP2-202ENST00000378034 PHBP35232 272 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 SKIV2L2P42285 1042 aaKnown RBP12.92□□□□□ -0.34
CKAP2-202ENST00000378034 CLCN7P51798 805 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 NAB1Q13506 487 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 GPR18Q14330 331 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 GBX1Q14549 363 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 TEX35Q5T0J7 233 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 CAPN12Q6ZSI9 719 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 PIM3Q86V86 326 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 ZBTB2Q8N680 514 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 FERD3LQ96RJ6 166 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 POLG2Q9UHN1 485 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 DHRS7Q9Y394 339 aa12.92□□□□□ -0.34
CKAP2-202ENST00000378034 CFAP20Q9Y6A4 193 aaKnown RBP12.92□□□□□ -0.34
CKAP2-202ENST00000378034 D6RAR5 112 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 EIF3FO00303 357 aaPredicted RBP12.91□□□□□ -0.34
CKAP2-202ENST00000378034 KDM1AO60341 852 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 RPN2P04844 631 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 AMZ1Q400G9 498 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 KLHL35Q6PF15 583 aa12.91□□□□□ -0.34
CKAP2-202ENST00000378034 WDR74Q6RFH5 385 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms