RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 EDEM1Q92611 657 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MINDY3Q9H8M7 445 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 NLE1Q9NVX2 485 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-201ENST00000377861 MARK1Q9P0L2 795 aa4.87□□□□□ -1.63
PCDH9-201ENST00000377861 FOXE1O00358 373 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 IL1AP01583 271 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLC10A6Q3KNW5 377 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 DHRS4L2Q6PKH6 230 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SMOC2Q9H3U7 446 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLC32A1Q9H598 525 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 HEBP1Q9NRV9 189 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CLEC11AQ9Y240 323 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ATP6V1B1P15313 513 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 AGMOQ6ZNB7 445 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TMCO2Q7Z6W1 182 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SUSD3Q96L08 255 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 BBS2Q9BXC9 721 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 RC3H2Q9HBD1 1191 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SRP68Q9UHB9 627 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 EXOSC1Q9Y3B2 195 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GKP32189 559 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ACSL1P33121 698 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 VASPP50552 380 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 STC1P52823 247 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LIPEQ05469 1076 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PARP8Q8N3A8 854 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PDCD10Q9BUL8 212 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PLEKHA6Q9Y2H5 1048 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UGT2B17O75795 530 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MGAT1P26572 445 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UGT2B15P54855 530 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CTC1Q2NKJ3 1217 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FAM109AQ8N4B1 249 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ACER1Q8TDN7 264 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZBTB10Q96DT7 871 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CAPSQ13938 189 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 XKR4Q5GH76 650 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 LSM14AQ8ND56 463 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TAS2R14Q9NYV8 317 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PHRF1Q9P1Y6 1649 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 EEDO75530 441 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 RAB36O95755 333 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GAAP10253 952 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC142Q17RM4 750 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FAM117BQ6P1L5 589 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CDT1Q9H211 546 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 T-ENOLP0DO92 83 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 STXBP1P61764 594 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 HKDC1Q2TB90 917 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MYLK3Q32MK0 819 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GSTCDQ8NEC7 633 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 POP1Q99575 1024 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 STOX2Q9P2F5 926 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GID4Q8IVV7 300 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 WFIKKN2Q8TEU8 576 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 POMKQ9H5K3 350 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CDHR5Q9HBB8 845 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 TRPV5Q9NQA5 729 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SPDYE7PQ495Y7 208 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ATP13A5Q4VNC0 1218 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GPR107Q5VW38 600 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ATG4CQ96DT6 458 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FDXACB1Q9BRP7 624 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZCWPW1Q9H0M4 648 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 BACE2Q9Y5Z0 518 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MMP12P39900 470 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 IRF4Q15306 451 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF578Q96N58 590 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CDC6Q99741 560 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MTMR10Q9NXD2 777 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 A0A087WWV3 80 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1B0GTQ1 180 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SMIM22K7EJ46 135 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CACNG3O60359 315 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CST3P01034 146 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 UBA1P22314 1058 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 EPHA3P29320 983 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CASP2P42575 452 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 DPP6P42658 865 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 STT3AP46977 705 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SCARA5Q6ZMJ2 495 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MAELQ96JY0 434 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 MRPS33Q9Y291 106 aaKnown RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FABP12A6NFH5 140 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NEMP1O14524 444 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GSSP48637 474 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 CLDN8P56748 225 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 GJB7Q6PEY0 223 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF540Q8NDQ6 660 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SLC6A15Q9H2J7 730 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 PMPCBO75439 489 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 NFICP08651 508 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF182P17025 639 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-201ENST00000377861 BDH1Q02338 343 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 FOXR1Q6PIV2 292 aa4.86□□□□□ -1.63
PCDH9-201ENST00000377861 SPERTQ8NA61 448 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms