RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	GIPC1	O14908	333 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	SRPRA	P08240	638 aa	Known RBP	11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	CISD3	P0C7P0	127 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	LHCGR	P22888	699 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	MAGEA12	P43365	314 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	CDH13	P55290	713 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	ACAP2	Q15057	778 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	ZNF423	Q2M1K9	1284 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	VWA5B1	Q5TIE3	1220 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	CLEC14A	Q86T13	490 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	ZNF781	Q8N8C0	355 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	GALNT6	Q8NCL4	622 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	PSD4	Q8NDX1	1056 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	C7orf26	Q96N11	449 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	ACOX2	Q99424	681 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	EGFL8	Q99944	293 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	HGH1	Q9BTY7	390 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	FKBP14	Q9NWM8	211 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	ARMCX1	Q9P291	453 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	GALP	Q9UBC7	116 aa		11.51	□□□□□ -0.57
LMO7-204	ENST00000377499	OBSL1	O75147	1896 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	UBXN8	O00124	270 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	GUCA1C	O95843	209 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	MPST	P25325	297 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	BOP1	Q14137	746 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	GRIN2C	Q14957	1233 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	TSN	Q15631	228 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	GRAMD1B	Q3KR37	738 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ATP13A5	Q4VNC0	1218 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ARL13A	Q5H913	290 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ALYREF	Q86V81	257 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	FLCN	Q8NFG4	579 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	EEF1AKMT1	Q8WVE0	214 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ISL2	Q96A47	359 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	MRGPRX3	Q96LB0	322 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	C1QTNF1	Q9BXJ1	281 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	GNPTG	Q9UJJ9	305 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	SZT2	Q5T011	3432 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	LOC105371267	A0A1B0GV96	52 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	PCDH8	O95206	1070 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ESR1	P03372	595 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	POU2F2	P09086	479 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	PCNA	P12004	261 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ZNF37A	P17032	561 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ADSL	P30566	484 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	MTHFR	P42898	656 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	RGS4	P49798	205 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	PTS	Q03393	145 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	HSPA14	Q0VDF9	509 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	CDC16	Q13042	620 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ADAM15	Q13444	863 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	IGSF11	Q5DX21	431 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	LPCAT4	Q643R3	524 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	SIGIRR	Q6IA17	410 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	NEK5	Q6P3R8	708 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	TMEM207	Q6UWW9	146 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	RDH11	Q8TC12	318 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	C10orf82	Q8WW14	230 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	IGSF5	Q9NSI5	407 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	NUMBL	Q9Y6R0	609 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ANKRD36	A6QL64	1941 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	EDDM13	A0A1B0GTR0	161 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	KLF11	O14901	512 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	CRYZL1	O95825	349 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	CTSL	P07711	333 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	KCNA5	P22460	613 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	FDXR	P22570	491 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	PBLD	P30039	288 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	SLC5A2	P31639	672 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	VIPR1	P32241	457 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	XIAP	P98170	497 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	TYSND1	Q2T9J0	566 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	SETMAR	Q53H47	684 aa	Predicted RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	CES4A	Q5XG92	561 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	DSG4	Q86SJ6	1040 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	NKAP	Q8N5F7	415 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	TXNDC5	Q8NBS9	432 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	OR7G1	Q8NGA0	311 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	STAG3L4	Q8TBR4	150 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ACTRT2	Q8TDY3	377 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ATP6V1E2	Q96A05	226 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ESAM	Q96AP7	390 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	RIOK2	Q9BVS4	552 aa	Known RBP	11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	ANGPTL2	Q9UKU9	493 aa		11.5	□□□□□ -0.57
LMO7-204	ENST00000377499	TRANK1	O15050	2925 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	GBF1	Q92538	1859 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	ARHGAP10	A1A4S6	786 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CFAP99	D6REC4	459 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499		J3QRK9	145 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CDC7	O00311	574 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	MSH3	P20585	1137 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	METAP1	P53582	386 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	RNF43	Q68DV7	783 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SDE2	Q6IQ49	451 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	HEATR4	Q86WZ0	1026 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CENPS	Q8N2Z9	138 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	FBXO39	Q8N4B4	442 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	AFAP1L2	Q8N4X5	818 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	FRS2	Q8WU20	508 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms