RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PDZD8Q8NEN9 1154 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 TUBA1CQ9BQE3 449 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 ING2Q9H160 280 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 SMPD4Q9NXE4 827 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 LHX3Q9UBR4 397 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 CCL27Q9Y4X3 112 aa24.87■■□□□ 1.57
C9orf40-201ENST00000376854 B4GAT1O43505 415 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 CTPS1P17812 591 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 SHMT2P34897 504 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 POLR2IP36954 125 aaKnown RBP24.86■■□□□ 1.57
C9orf40-201ENST00000376854 ELMSAN1Q6PJG2 1045 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 OR2T12Q8NG77 320 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 CCDC115Q96NT0 180 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 ZBTB18Q99592 522 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 TTPALQ9BTX7 342 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 CLPBQ9H078 707 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 ELOVL2Q9NXB9 296 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 GSTA4O15217 222 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 FOXD2O60548 495 aaPredicted RBP24.86■■□□□ 1.57
C9orf40-201ENST00000376854 PTGR1Q14914 329 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 CERS6Q6ZMG9 384 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 FAM86B1Q8N7N1 296 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 UGT2B28Q9BY64 529 aa24.86■■□□□ 1.57
C9orf40-201ENST00000376854 CARS2Q9HA77 564 aaKnown RBP24.86■■□□□ 1.57
C9orf40-201ENST00000376854 TAPBPO15533 448 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 AOC2O75106 756 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 CPNE6O95741 557 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 HMGCLP35914 325 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ELAVL2Q12926 359 aaKnown RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 FGD3Q5JSP0 725 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 FAM151BQ6UXP7 276 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 THUMPD3Q9BV44 507 aaKnown RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 GORASP2Q9H8Y8 452 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 EIF3LQ9Y262 564 aaKnown RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 FFAR3O14843 346 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 MAGEB3O15480 346 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 GPR42O15529 346 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 RGS14O43566 566 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 GLUD1P00367 558 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ALPIP09923 528 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ZNF7P17097 686 aaPredicted RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 RPL17P18621 184 aaKnown RBP24.85■■□□□ 1.57
C9orf40-201ENST00000376854 MSH3P20585 1137 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 RHOAP61586 193 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ENPP6Q6UWR7 440 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 SERPINA9Q86WD7 417 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ZDHHC13Q8IUH4 622 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 SLC43A3Q8NBI5 491 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 FBXO22Q8NEZ5 403 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 OR10A6Q8NH74 314 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 FBXO30Q8TB52 745 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 MIPOL1Q8TD10 442 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 WBP2Q969T9 261 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 BOCQ9BWV1 1114 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 SRRDQ9UH36 339 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 ANGPTL3Q9Y5C1 460 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 TET1Q8NFU7 2136 aa24.85■■□□□ 1.57
C9orf40-201ENST00000376854 SH3PXD2BA1X283 911 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FZD6O60353 706 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 NOL3O60936 208 aaKnown RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 MZF1P28698 734 aaPredicted RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 AKT1P31749 480 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 PIK3CGP48736 1102 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FAM174BQ3ZCQ3 159 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 ATXN7L2Q5T6C5 722 aaPredicted RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FAM117BQ6P1L5 589 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 CHCHD4Q8N4Q1 142 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 GTF2H4Q92759 462 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 SDCCAG3Q96C92 435 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 EGFL8Q99944 293 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 APOL5Q9BWW9 433 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FCF1Q9Y324 198 aaKnown RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 OARD1Q9Y530 152 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 G3V2T6 193 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 SELPP16109 830 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 RGS4P49798 205 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 MAPKAPK3Q16644 382 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 LHX8Q68G74 356 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 OR13F1Q8NGS4 319 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 LKAAEAR1Q8TD35 194 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 CNDP2Q96KP4 475 aaKnown RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FAM126AQ9BYI3 521 aaPredicted RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 FANCEQ9HB96 536 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 MAGEE1Q9HCI5 957 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 TMEM9Q9P0T7 183 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 LIMD1Q9UGP4 676 aa24.84■■□□□ 1.57
C9orf40-201ENST00000376854 EVLQ9UI08 416 aaPredicted RBP24.84■■□□□ 1.57
C9orf40-201ENST00000376854 PRAMEF1O95521 474 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 MBL2P11226 248 aaPredicted RBP24.83■■□□□ 1.57
C9orf40-201ENST00000376854 GDF5P43026 501 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 CYP4F3Q08477 520 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 GRSF1Q12849 480 aaKnown RBP eCLIP24.83■■□□□ 1.57
C9orf40-201ENST00000376854 ZNF548Q8NEK5 533 aaPredicted RBP24.83■■□□□ 1.57
C9orf40-201ENST00000376854 CD99L2Q8TCZ2 262 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 OVCA2Q8WZ82 227 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 TOR3AQ9H497 397 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 ELAC1Q9H777 363 aaKnown RBP24.83■■□□□ 1.57
C9orf40-201ENST00000376854 ADGRE2Q9UHX3 823 aa24.83■■□□□ 1.57
C9orf40-201ENST00000376854 TRIM64BA6NI03 449 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms