RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 COLGALT1Q8NBJ5 622 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 LGALS12Q96DT0 336 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 RIPOR3Q96MK2 946 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ASB2Q96Q27 587 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 AGAP2Q99490 1192 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 EML4Q9HC35 981 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ITM2CQ9NQX7 267 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 XPR1Q9UBH6 696 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 NUP50Q9UKX7 468 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 TCRBV5S2A0A599 114 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 PABPN1LA6NDY0 278 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ADAM12O43184 909 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 PRKD3O94806 890 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 MED26O95402 600 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 RPLP2P05387 115 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 PSMB9P28065 219 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CD47Q08722 323 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 C5orf22Q49AR2 442 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 BEND5Q7L4P6 421 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 KCTD4Q8WVF5 259 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 SUSD3Q96L08 255 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 HSFY1Q96LI6 401 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 RNF145Q96MT1 663 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CASD1Q96PB1 797 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 C6orf62Q9GZU0 229 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 KAT8Q9H7Z6 458 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 PIGVQ9NUD9 493 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ARHGEF15O94989 841 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 AGXTP21549 392 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 SLC9A3P48764 834 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 NR2C2P49116 596 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CAPRIN1Q14444 709 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 USP10Q14694 798 aaKnown RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 FAM205BPQ63HN1 556 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 FAM122CQ6P4D5 195 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CNSTQ6PJW8 725 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 KIAA1958Q8N8K9 716 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 CCNYQ8ND76 341 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 BRSK1Q8TDC3 778 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 HTR3CQ8WXA8 447 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 C8orf48Q96LL4 319 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 FCRL3Q96P31 734 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 C1QTNF1Q9BXJ1 281 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 MAP10Q9P2G4 905 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 A0A0J9YYE9 177 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 KRT87PA6NCN2 255 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 HNRNPLP14866 589 aaKnown RBP eCLIP11.96□□□□□ -0.493e-10■■■□□ 15.4
C9orf3-203ENST00000375315 SNX16P57768 344 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 BNC1Q01954 994 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 GBE1Q04446 702 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 FUT10Q6P4F1 479 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 ZDHHC13Q8IUH4 622 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 ACBD6Q9BR61 282 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 FEM1AQ9BSK4 669 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 ACAT2Q9BWD1 397 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
C9orf3-203ENST00000375315 INTS6Q9UL03 887 aaKnown RBP11.96□□□□□ -0.49
C9orf3-203ENST00000375315 PNMA8BQ9ULN7 279 aaPredicted RBP11.96□□□□□ -0.49
C9orf3-203ENST00000375315 BTBD3Q9Y2F9 522 aa11.96□□□□□ -0.49
C9orf3-203ENST00000375315 A8MV72 311 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 FAM72CH0Y354 149 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 UBXN8O00124 270 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 ARHGEF9O43307 516 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 NOS1APO75052 506 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 GALTP07902 379 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 F7P08709 466 aaPredicted RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 SLC6A2P23975 617 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 DNAJB1P25685 340 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 MATKP42679 507 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 CLK1P49759 484 aaKnown RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 SERPINH1P50454 418 aaKnown RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 FOXM1Q08050 763 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 DGCR6Q14129 220 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 CTU2Q2VPK5 515 aaKnown RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 TBRG1Q3YBR2 411 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 CCNJQ5T5M9 372 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 FAM72AQ5TYM5 149 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 FAM72DQ6L9T8 149 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 FAM72BQ86X60 149 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 MCOLN3Q8TDD5 553 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 TMBIM1Q969X1 311 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 NUAK2Q9H093 628 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 DCSTAMPQ9H295 470 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 ALG2Q9H553 416 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 ACOXLQ9NUZ1 547 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 POLHQ9Y253 713 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms