RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NDNQ99608 321 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 RBBP8Q99708 897 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 PARD6BQ9BYG5 372 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 STN1Q9H668 368 aaKnown RBP14.69□□□□□ -0.06
HSPG2-201ENST00000374673 POT1Q9NUX5 634 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 TOR4AQ9NXH8 423 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 ZNF624Q9P2J8 865 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-201ENST00000374673 TXNDC16Q9P2K2 825 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 GALPQ9UBC7 116 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 CPNE7Q9UBL6 633 aa14.69□□□□□ -0.06
HSPG2-201ENST00000374673 TRBV23OR9-2A0A075B6M9 112 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 FAM95CA0A1B0GW59 222 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 OR52A4PA6NMU1 304 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 IFRD1O00458 451 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GP1BAP07359 652 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 MTHFD1P11586 935 aaKnown RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 ATP5DP30049 168 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 TIAL1Q01085 375 aaKnown RBP eCLIP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 HHEXQ03014 270 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 ILKQ13418 452 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 NR1D2Q14995 579 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 RPE65Q16518 533 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GRTP1Q5TC63 336 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 HECTD2Q5U5R9 776 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 UGT3A1Q6NUS8 523 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 EFL1Q7Z2Z2 1120 aaKnown RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 ZNF438Q7Z4V0 828 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 PDZD3Q86UT5 571 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 ZBTB2Q8N680 514 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GIMAP7Q8NHV1 300 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 IFI44Q8TCB0 444 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 CD200R1Q8TD46 325 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 C12orf66Q96MD2 445 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GPR21Q99679 349 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 EPB41L4BQ9H329 900 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 TAS2R13Q9NYV9 303 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 LRIT1Q9P2V4 623 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 DHRS7Q9Y394 339 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 PCDHGA1Q9Y5H4 931 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 RNF215Q9Y6U7 377 aa14.68□□□□□ -0.06
HSPG2-201ENST00000374673 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
HSPG2-201ENST00000374673 PIEZO1Q92508 2521 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 DCDC2BA2VCK2 349 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 CPED1A4D0V7 1026 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 PPM1DO15297 605 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 DKK1O94907 266 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 VIPP01282 170 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 FDXRP22570 491 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 ACADLP28330 430 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SPRP35270 261 aaPredicted RBP14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SKIV2L2P42285 1042 aaKnown RBP14.67□□□□□ -0.06
HSPG2-201ENST00000374673 LIMK2P53671 638 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 TTLL9Q3SXZ7 439 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 PERM1Q5SV97 790 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 EMBQ6PCB8 327 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 VRK3Q8IV63 474 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 RBM12BQ8IXT5 1001 aaKnown RBP14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SIDT2Q8NBJ9 832 aaKnown RBP14.67□□□□□ -0.06
HSPG2-201ENST00000374673 INPP5DQ92835 1189 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 CCDC74AQ96AQ1 378 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SH3KBP1Q96B97 665 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 FAM136AQ96C01 138 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 CXorf40BQ96DE9 158 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 ATXN7L3BQ96GX2 97 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 GPR22Q99680 433 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SLC30A3Q99726 388 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 UCK1Q9HA47 277 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 IMP3Q9NV31 184 aaKnown RBP14.67□□□□□ -0.06
HSPG2-201ENST00000374673 VWA7Q9Y334 891 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 HEBP2Q9Y5Z4 205 aa14.67□□□□□ -0.06
HSPG2-201ENST00000374673 SPAARA0A1B0GVQ0 90 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 RHPN2P1A8MT19 583 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 EIF3FO00303 357 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-201ENST00000374673 GIPC1O14908 333 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 RFPL3O75679 317 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 CBSLP0DN79 551 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 NDUFS1P28331 727 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 CBSP35520 551 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 GPR3P46089 330 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 CDKN2DP55273 166 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 BIRC2Q13490 618 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 SLC29A2Q14542 456 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 NAA30Q147X3 362 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-201ENST00000374673 NEK10Q6ZWH5 1172 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 TRIM48Q8IWZ4 208 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 ZFPM2Q8WW38 1151 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 SLC44A1Q8WWI5 657 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 TFGQ92734 400 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-201ENST00000374673 CAVIN3Q969G5 261 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 ELMO2Q96JJ3 720 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 OLFM1Q99784 485 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-201ENST00000374673 SLC40A1Q9NP59 571 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 TRMT6Q9UJA5 497 aaKnown RBP14.66□□□□□ -0.06
HSPG2-201ENST00000374673 CFAP20Q9Y6A4 193 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms