RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 RAB3BP20337 219 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 CXCR2P25025 360 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 ERVFC1P60507 584 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 ALDH6A1Q02252 535 aaKnown RBP10.11□□□□□ -0.79
CD28-202ENST00000374481 FAPQ12884 760 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 LIN54Q6MZP7 749 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
CD28-202ENST00000374481 ZBTB45Q96K62 511 aaPredicted RBP10.11□□□□□ -0.79
CD28-202ENST00000374481 ARL5BQ96KC2 179 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 TSNAXQ99598 290 aaKnown RBP10.11□□□□□ -0.79
CD28-202ENST00000374481 MAP10Q9P2G4 905 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 ZNF490Q9ULM2 529 aaPredicted RBP10.11□□□□□ -0.79
CD28-202ENST00000374481 PCDHGA8Q9Y5G5 932 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 PSAT1Q9Y617 370 aa10.11□□□□□ -0.79
CD28-202ENST00000374481 RIC1Q4ADV7 1423 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CDRT1O95170 752 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 APOC1P02654 83 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 PEPDP12955 493 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 AGXTP21549 392 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 KCTD2Q14681 263 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CRTC2Q53ET0 693 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 GPRIN3Q6ZVF9 776 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CIR1Q86X95 450 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 OXR1Q8N573 874 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 TMEM161BQ8NDZ6 487 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 FAM83FQ8NEG4 500 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 OR8K5Q8NH50 307 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ASB15Q8WXK1 588 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 MOCOSQ96EN8 888 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 METTL2AQ96IZ6 378 aaKnown RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 FAM167AQ96KS9 214 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 PPP3R2Q96LZ3 170 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 SETD4Q9NVD3 440 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 RBM22Q9NW64 420 aaKnown RBP eCLIP10.1□□□□□ -0.79
CD28-202ENST00000374481 STOX2Q9P2F5 926 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 FEM1BQ9UK73 627 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 HCN2Q9UL51 889 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 NWD1Q149M9 1564 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 TCAF2A6NFQ2 919 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 GOT1P17174 413 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 HOXB8P17481 243 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 GADD45AP24522 165 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 DDOSTP39656 456 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 POLD2P49005 469 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 AP2S1P53680 142 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 CSTF1Q05048 431 aaKnown RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 NDUFAF5Q5TEU4 345 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 LCN8Q6JVE9 175 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 USP30Q70CQ3 517 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 NT5DC4Q86YG4 428 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ZSWIM3Q96MP5 696 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CCDC115Q96NT0 180 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 KIFC1Q9BW19 673 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 AGPAT4Q9NRZ5 378 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ABCB8Q9NUT2 735 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 B3GNT2Q9NY97 397 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 DNMT3LQ9UJW3 386 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 VWA7Q9Y334 891 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 PCDHAC2Q9Y5I4 1007 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 PSMD10O75832 226 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 FCER2P06734 321 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 TAL1P17542 331 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 GRAPQ13588 217 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CAMK1Q14012 370 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 FGL2Q14314 439 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 LRRC66Q68CR7 880 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CREB3L2Q70SY1 520 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 KRT78Q8N1N4 520 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 GRAPLQ8TC17 118 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 ZNF675Q8TD23 568 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ING5Q8WYH8 240 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ZNF641Q96N77 438 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 HPF1Q9NWY4 346 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 TAS2R7Q9NYW3 318 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ACTR10Q9NZ32 417 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 SPASTQ9UBP0 616 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 INTS6Q9UL03 887 aaKnown RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 CLEC4AQ9UMR7 237 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 POLR3HQ9Y535 204 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 TRAV6A0A075B6T7 132 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 A0A1W2PQ67 120 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 KPNA5O15131 536 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 SUV39H1O43463 412 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ERBB2P04626 1255 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 LCKP06239 509 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 CCR1P32246 355 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ICAM3P32942 547 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 RORAP35398 523 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 TAS2R39P59534 338 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 EMX1Q04741 257 aaPredicted RBP10.1□□□□□ -0.79
CD28-202ENST00000374481 STX4Q12846 297 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ZRANB3Q5FWF4 1079 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 ST8SIA2Q92186 375 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 SORT1Q99523 831 aa10.1□□□□□ -0.79
CD28-202ENST00000374481 NLNQ9BYT8 704 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms