RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PSMA4P25789 261 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 HTR1EP28566 365 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CA8P35219 290 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CTNNB1P35222 781 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 HSD17B2P37059 387 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 HNF4AP41235 474 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 RPIAP49247 311 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 POLR2JP52435 117 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 THOP1P52888 689 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CDH13P55290 713 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 PTSQ03393 145 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 DPTQ07507 201 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CSTF3Q12996 717 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CEACAM7Q14002 265 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 ADGRE1Q14246 886 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CHRNA6Q15825 494 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 TMEM240Q5SV17 173 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 TMEM198Q66K66 360 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 LRRC66Q68CR7 880 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 IZUMO2Q6UXV1 221 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CYHR1Q6ZMK1 362 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 DPY19L3Q6ZPD9 716 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 OTOP2Q7RTS6 562 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 ADIPOR2Q86V24 386 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 HID1Q8IV36 788 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 MARVELD2Q8N4S9 558 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 L3MBTL4Q8NA19 623 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 OR2A12Q8NGT7 310 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 OR2T34Q8NGX1 318 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 OR2T3Q8NH03 318 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CSGALNACT1Q8TDX6 532 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 GDPD5Q8WTR4 605 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 GATA6Q92908 595 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 GLMNQ92990 594 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 USP7Q93009 1102 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 WBP2Q969T9 261 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 REPS1Q96D71 796 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CLPTM1LQ96KA5 538 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CCDC138Q96M89 665 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 NSMCE3Q96MG7 304 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 TRAPPC9Q96Q05 1148 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 EGFL8Q99944 293 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 RMND5AQ9H871 391 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 SEMA4BQ9NPR2 832 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 CCM2LQ9NUG4 571 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 WWOXQ9NZC7 414 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 GALPQ9UBC7 116 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 IL36AQ9UHA7 158 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 MAGEL2Q9UJ55 1249 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 PADI4Q9UM07 663 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 GPR34Q9UPC5 381 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 WBP11Q9Y2W2 641 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 DTNAQ9Y4J8 743 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 MYLKQ15746 1914 aa8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 MTCL1Q9Y4B5 1905 aaKnown RBP8.56□□□□□ -1.04
SNRNP40-202ENST00000373720 HELZP42694 1942 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 EDDM13A0A1B0GTR0 161 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 A6NHS1 94 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 MEI4A8MW99 385 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TMEM233B4DJY2 109 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 NEDD8-MDP1E9PL57 170 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 H3BNX3 289 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FBP2O00757 339 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 VEGFDO43915 354 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 KCNJ13O60928 360 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 ERN1O75460 977 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 GJB3O75712 270 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 SIX3O95343 332 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TRIM16O95361 564 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CATP04040 527 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 JUNP05412 331 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 ALPIP09923 528 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CTPS1P17812 591 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 MAP4P27816 1152 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TEAD1P28347 426 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 RPL3P39023 403 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CASP2P42575 452 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 RXRGP48443 463 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 DGKGP49619 791 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 SESN3P58005 492 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 C21orf58P58505 322 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 EPS8Q12929 822 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 PTPRCAPQ14761 206 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TRIP10Q15642 601 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FUT11Q495W5 492 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TCHHL1Q5QJ38 904 aaPredicted RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 INTS11Q5TA45 600 aaKnown RBP8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FAM46CQ5VWP2 391 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 CLEC6AQ6EIG7 209 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 GOLGA7Q7Z5G4 137 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 UBE2Q1Q7Z7E8 422 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 SYVN1Q86TM6 617 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 ZFAND4Q86XD8 727 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TMEM25Q86YD3 366 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 RASGRP3Q8IV61 690 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 FUNDC1Q8IVP5 155 aa8.55□□□□□ -1.04
SNRNP40-202ENST00000373720 TBC1D21Q8IYX1 336 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms