RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 LRRTM4Q86VH4 590 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 BPHLQ86WA6 291 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 KLHDC8BQ8IXV7 354 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 SIDT2Q8NBJ9 832 aaKnown RBP18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 OR4K2Q8NGD2 314 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 BRSK1Q8TDC3 778 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 C1orf54Q8WWF1 131 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 TTC25Q96NG3 672 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 TIMM29Q9BSF4 260 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 RAB33BQ9H082 229 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 ARNT2Q9HBZ2 717 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 ACSS2Q9NR19 701 aa18.75■□□□□ 0.59
TRAPPC3-204ENST00000373166 A1L4Q6 167 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 TIAF1O95411 115 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 PRAMEF1O95521 474 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 IFNB1P01574 187 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 CCL11P51671 97 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 GPR18Q14330 331 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 LDLRAP1Q5SW96 308 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 KCTD11Q693B1 232 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 PWWP2BQ6NUJ5 590 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 SYVN1Q86TM6 617 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 TRAPPC5Q8IUR0 188 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 TAB3Q8N5C8 712 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 MAIP1Q8WWC4 291 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 UBXN4Q92575 508 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 ING2Q9H160 280 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 MLXIPLQ9NP71 852 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 TMPRSS11EQ9UL52 423 aa18.74■□□□□ 0.59
TRAPPC3-204ENST00000373166 RP1L1Q8IWN7 2480 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 OR52A4PA6NMU1 304 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 SORBS2O94875 1100 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 AP2A1O95782 977 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 BRAFP15056 766 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 IDSP22304 550 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 RPL10P27635 214 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 AKT1P31749 480 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 SNX1Q13596 522 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 PTPRCAPQ14761 206 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 KHDC1Q4VXA5 237 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 AGAP9Q5VTM2 703 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 PAPD7Q5XG87 772 aaKnown RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 CPZQ66K79 652 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 DENND5AQ6IQ26 1287 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 FAM199XQ6PEV8 388 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 WASH2PQ6VEQ5 465 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 CCDC89Q8N998 374 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 DDHD1Q8NEL9 900 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 SLC41A2Q96JW4 573 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 CASS4Q9NQ75 786 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 WASH6PQ9NQA3 447 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 SMOXQ9NWM0 555 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 FKBPLQ9UIM3 349 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZKSCAN5Q9Y2L8 839 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZNF451Q9Y4E5 1061 aa18.73■□□□□ 0.59
TRAPPC3-204ENST00000373166 ARGFXA6NJG6 315 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 ERI2A8K979 691 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 GAPDHSO14556 408 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 GPR39O43194 453 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A9O60656 530 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 FGGP02679 453 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 RNF224P0DH78 156 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 FOLR1P15328 257 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 VCLP18206 1134 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A6P19224 532 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A1P22309 533 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A4P22310 534 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 VARSP26640 1264 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 FDFT1P37268 417 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 LMAN1P49257 510 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZNF140P52738 457 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 RPS18P62269 152 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 ACY1Q03154 408 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 TMEM115Q12893 351 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 CHAF1BQ13112 559 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 INPP5JQ15735 1006 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 GPRC6AQ5T6X5 926 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 LINC00523Q86TU6 105 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 ZNF398Q8TD17 642 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 RUFY1Q96T51 708 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 C19orf43Q9BQ61 176 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 SLC29A3Q9BZD2 475 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 AKIRIN1Q9H9L7 192 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A7Q9HAW7 530 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A10Q9HAW8 530 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 UGT1A8Q9HAW9 530 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 SEMA5BQ9P283 1151 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 FARSAQ9Y285 508 aaKnown RBP18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 PCDHGB7Q9Y5F8 929 aa18.72■□□□□ 0.59
TRAPPC3-204ENST00000373166 IGHV5-51A0A0C4DH38 117 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 E7EVH7 732 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 CEP104O60308 925 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 SRP72O76094 671 aaKnown RBP18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 HADHAP40939 763 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 HALP42357 657 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 ARL4DP49703 201 aa18.71■□□□□ 0.59
TRAPPC3-204ENST00000373166 DRG2P55039 364 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms