RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 HERVK_113P63132 956 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 PHC1P78364 1004 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SEMA3BQ13214 749 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GBX1Q14549 363 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ARHGEF6Q15052 776 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 RBBP7Q16576 425 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 UAP1L1Q3KQV9 507 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ARL13BQ3SXY8 428 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 RUNDC3AQ59EK9 446 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ZMAT1Q5H9K5 638 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CES5AQ6NT32 575 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 PAQR3Q6TCH7 311 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 TMC5Q6UXY8 1006 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GADL1Q6ZQY3 521 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 RFPL4BQ6ZWI9 263 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 FAM83AQ86UY5 434 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CYP4Z1Q86W10 505 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GALNT13Q8IUC8 556 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ARMC8Q8IUR7 673 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 PACRGLQ8N7B6 248 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GPR152Q8TDT2 470 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 AFG1LQ8WV93 481 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 STON2Q8WXE9 905 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 PROX1Q92786 737 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 NCLNQ969V3 563 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 Q96MT0 163 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CDK5RAP1Q96SZ6 601 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SPOCK3Q9BQ16 436 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 KCNS3Q9BQ31 491 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 THUMPD3Q9BV44 507 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ERVK-6Q9BXR3 956 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 REXO4Q9GZR2 422 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SLIRPQ9GZT3 109 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 DSN1Q9H410 356 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ACTL8Q9H568 366 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GLOD4Q9HC38 313 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ZFP14Q9HCL3 533 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CD320Q9NPF0 282 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 TREX1Q9NSU2 369 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 DDX28Q9NUL7 540 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 PRMT7Q9NVM4 692 aaPredicted RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 FBXW11Q9UKB1 542 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 INTS6Q9UL03 887 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 NEUROG3Q9Y4Z2 214 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SNX5Q9Y5X3 404 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 MCM3APO60318 1980 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 MYO15AQ9UKN7 3530 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SMIM28A0A1B0GU29 152 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 A0A1W2PP18 115 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 FAM92AA1XBS5 289 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 FAM25EA8MYX2 175 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 RAD51BO15315 384 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MAFKO60675 156 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DAB1O75553 588 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SLC22A3O75751 556 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ANGPTL1O95841 491 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 VIPP01282 170 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CHRNA1P02708 482 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HAPLN1P10915 354 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CD1DP15813 335 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GDF5P43026 501 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CLCNKBP51801 687 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DNAJB13P59910 316 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ZXDBP98169 803 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HMGCS1Q01581 520 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 POU4F1Q01851 419 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CDK5R2Q13319 367 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SLC14A1Q13336 389 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GTF2H3Q13889 308 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HIST2H2ACQ16777 129 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 RFTN2Q52LD8 501 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CARD16Q5EG05 197 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 MRPL14Q6P1L8 145 aaKnown RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DLEU7Q6UYE1 221 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GCNT7Q6ZNI0 430 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 GDPD3Q7L5L3 318 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ABI3BPQ7Z7G0 1075 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CILP2Q8IUL8 1156 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CCDC71Q8IV32 467 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TBC1D21Q8IYX1 336 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 SLC38A6Q8IZM9 456 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ATPAF2Q8N5M1 289 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 APPL2Q8NEU8 664 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DYNC2LI1Q8TCX1 351 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 DPF3Q92784 378 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 NT5C3BQ969T7 300 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 LGALS12Q96DT0 336 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PCED1BQ96HM7 432 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ZFYVE19Q96K21 471 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 EXOC2Q96KP1 924 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF583Q96ND8 569 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 CITED4Q96RK1 184 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 HOPXQ9BPY8 73 aaPredicted RBP5.33□□□□□ -1.56
ATG4A-204ENST00000372246 PSD2Q9BQI7 771 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 BDH2Q9BUT1 245 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 TRIM15Q9C019 465 aa5.33□□□□□ -1.56
ATG4A-204ENST00000372246 ROGDIQ9GZN7 287 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms