RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 OR6C65A6NJZ3 312 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 MEIS3P2A8K0S8 358 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 TRDMT1O14717 391 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 AVILO75366 819 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SNAP29O95721 258 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 TRUB2O95900 331 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ECDO95905 644 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PFKMP08237 780 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CYP2A6P11509 494 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 IFI30P13284 250 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ITGALP20701 1170 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ERP29P30040 261 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 IKZF1Q13422 519 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 TRIM25Q14258 630 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 POLD3Q15054 466 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 DCAF4L1Q3SXM0 396 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 FNBP1LQ5T0N5 605 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PCGF5Q86SE9 256 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CDH24Q86UP0 819 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 EPHX4Q8IUS5 362 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 OFCC1Q8IZS5 231 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RNF148Q8N7C7 305 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 OR6J1Q8NGC5 347 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 WDR48Q8TAF3 677 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SLC7A14Q8TBB6 771 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CYGBQ8WWM9 190 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PIP5K1AQ99755 562 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 BHLHE41Q9C0J9 482 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ROGDIQ9GZN7 287 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CXCL16Q9H2A7 254 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ABHD16BQ9H3Z7 469 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 IARS2Q9NSE4 1012 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SETD4Q9NVD3 440 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 WARS2Q9UGM6 360 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 TSPAN16Q9UKR8 245 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 A0A1W2PRG6 482 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 KRT87PA6NCN2 255 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 APOC4-APOC2K7ER74 178 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 BTN3A1O00481 513 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CAPN5O15484 640 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CFLARO15519 480 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ARHGEF9O43307 516 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PIP5K1CO60331 668 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RFPL1O75677 317 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 VAPBO95292 243 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CLIC3O95833 236 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 APOA1P02647 267 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 APOC2P02655 101 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RPS17P08708 135 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CLEC2LP0C7M8 214 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 FGF3P11487 239 aaPredicted RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 MSX1P28360 303 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CRHR1P34998 444 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ATP6AP1Q15904 470 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PSMD5Q16401 504 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 GEN1Q17RS7 908 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 BRAT1Q6PJG6 821 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CCDC36Q8IYA8 594 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 DHRSXQ8N5I4 330 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 C12orf29Q8N999 325 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 OR52H1Q8NGJ2 320 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RSAD2Q8WXG1 361 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RCN3Q96D15 328 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PDXPQ96GD0 296 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 HSFY1Q96LI6 401 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 TEKT5Q96M29 485 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CNPY3Q9BT09 278 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 C9orf16Q9BUW7 83 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
ATG4A-203ENST00000372232 FBRSQ9HAH7 460 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 CRTAC1Q9NQ79 661 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 IFT46Q9NQC8 304 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PNPOQ9NVS9 261 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PCOLCE2Q9UKZ9 415 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 DERAQ9Y315 318 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 PRELID3BQ9Y3B1 194 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 IPPQ9Y573 584 aa8.72□□□□□ -1.01
ATG4A-203ENST00000372232 RRN3P2A6NIE6 340 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 C2CD4BA6NLJ0 364 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 A8MV72 311 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 STX16-NPEPL1H3BU86 382 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 PIK3R2O00459 728 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 KPNA5O15131 536 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GPR32O75388 356 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 TADA2AO75478 443 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ENDOD1O94919 500 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GSRP00390 522 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 TP53P04637 393 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ARAFP10398 606 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ENO3P13929 434 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ZNF30P17039 623 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RHOQP17081 205 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GPD1P21695 349 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 KELP23276 732 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 HMGCLP35914 325 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms