RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 DENND5AQ6IQ26 1287 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 OGFOD2Q6N063 350 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 NEPROQ6NW34 567 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 TMEM26Q6ZUK4 368 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 C14orf80Q86SX3 495 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SPPL2CQ8IUH8 684 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 LRRC49Q8IUZ0 686 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 DENND6AQ8IWF6 608 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 DDIASQ8IXT1 998 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CPXM2Q8N436 756 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SNX31Q8N9S9 440 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 HDAC10Q969S8 669 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF347Q96SE7 839 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 GLOD4Q9HC38 313 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ACSS2Q9NR19 701 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SDR39U1Q9NRG7 319 aaPredicted RBP11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 INIPQ9NRY2 104 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 ATAD3AQ9NVI7 634 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 SELENONQ9NZV5 590 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 OAZ3Q9UMX2 235 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
TSPAN1-201ENST00000372003 F5H5T6 163 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FAM72CH0Y354 149 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 GOLGA8TH3BQL2 631 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 K7EPI3 171 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FXYD1O00168 92 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 ARPC2O15144 300 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TBL1XO60907 577 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 ABCB7O75027 752 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 HPRP00739 348 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FUCA1P04066 466 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TYRP14679 529 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 LBPP18428 481 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 GSTM2P28161 218 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 HTR1EP28566 365 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 SLC6A11P48066 632 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 GABARAPL2P60520 117 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 RPS24P62847 133 aaKnown RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 HERVK_113P63132 956 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 MTA1Q13330 715 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 NR1D2Q14995 579 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 CRY1Q16526 586 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FAM72AQ5TYM5 149 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FAM72DQ6L9T8 149 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 ESRP1Q6NXG1 681 aaKnown RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FBXL22Q6P050 247 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 CYHR1Q6ZMK1 362 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 EFL1Q7Z2Z2 1120 aaKnown RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 SPATA19Q7Z5L4 167 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FAM72BQ86X60 149 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 FAM217AQ8IXS0 508 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TANKQ92844 425 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 RPRD1AQ96P16 312 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 ERVK-6Q9BXR3 956 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 WDR12Q9GZL7 423 aaKnown RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 TRPV5Q9NQA5 729 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 WNT16Q9UBV4 365 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 VWA7Q9Y334 891 aa11.28□□□□□ -0.6
TSPAN1-201ENST00000372003 KRBA1A5PL33 1030 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 STK25O00506 426 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 EI24O14681 340 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 TULP3O75386 442 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 E2F6O75461 281 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 ALBP02768 609 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 F7P08709 466 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 ALDOCP09972 364 aaKnown RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 HALP42357 657 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF460Q14592 562 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 MLF2Q15773 248 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 KIF19Q2TAC6 998 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 KANK2Q63ZY3 851 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 ZNF470Q6ECI4 717 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 TXNDC11Q6PKC3 985 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 RANBP10Q6VN20 620 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 TPRG1Q6ZUI0 275 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 RAB44Q7Z6P3 723 aaPredicted RBP11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 C12orf40Q86WS4 652 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 PHYKPLQ8IUZ5 450 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 SIX5Q8N196 739 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 CARNMT1Q8N4J0 409 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 NETO2Q8NC67 525 aa11.27□□□□□ -0.6
TSPAN1-201ENST00000372003 S100ZQ8WXG8 99 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms