RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC2A4P14672 509 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 SPRP35270 261 aaPredicted RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 HSD17B3P37058 310 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 SLC19A1P41440 591 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 RPIAP49247 311 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 PPM1FP49593 454 aaPredicted RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 CLCN7P51798 805 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 TAS2R39P59534 338 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
TPM3-211ENST00000368531 RPA4Q13156 261 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 KRT33BQ14525 404 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 RPE65Q16518 533 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 AGAP9Q5VTM2 703 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 GUSBP11Q6P575 273 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 WASH2PQ6VEQ5 465 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 EFL1Q7Z2Z2 1120 aaKnown RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 CPNE9Q8IYJ1 553 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 FAM181AQ8N9Y4 354 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 GIMAP7Q8NHV1 300 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 CD200R1Q8TD46 325 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 KCNJ9Q92806 393 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 INPP5DQ92835 1189 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 FERD3LQ96RJ6 166 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 PAFAH2Q99487 392 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 CDC6Q99741 560 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 OR52A5Q9H2C5 316 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 LRIT1Q9P2V4 623 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 CPNE7Q9UBL6 633 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 CORO1CQ9ULV4 474 aaPredicted RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 CDYLQ9Y232 598 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 RNF215Q9Y6U7 377 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 U3KQA8 63 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 KIR2DS5A0A0G2JLQ3 304 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 A0A0G2JNG1 304 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 DCDC2BA2VCK2 349 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SMIM23A6NLE4 172 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 OR5K4A6NMS3 321 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 KIR2DS3K7RE56 304 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 TM4SF5O14894 197 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 GIPC1O14908 333 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 PPM1DO15297 605 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 GPC4O75487 556 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SLCO2B1O94956 709 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 VIPP01282 170 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SHBGP04278 402 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 ITGA2BP08514 1039 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 CKMT2P17540 419 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 FDXRP22570 491 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 NOVA1P51513 510 aaKnown RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 LIMK2P53671 638 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 HHEXQ03014 270 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 ZNF460Q14592 562 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 KIR2DS5Q14953 304 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 TRIP6Q15654 476 aaKnown RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 TTLL9Q3SXZ7 439 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 MAP9Q49MG5 647 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 PERM1Q5SV97 790 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 PLEKHS1Q5SXH7 462 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 MROH9Q5TGP6 573 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 CAPRIN2Q6IMN6 1127 aaKnown RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 PAQR3Q6TCH7 311 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SLC9B2Q86UD5 537 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 PDZD3Q86UT5 571 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SLC22A15Q8IZD6 547 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 SFRP1Q8N474 314 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 Q8N9G6 341 aaPredicted RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 BAHD1Q8TBE0 780 aaPredicted RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 SLC44A1Q8WWI5 657 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 JPH3Q8WXH2 748 aaPredicted RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 TFGQ92734 400 aaPredicted RBP13.58□□□□□ -0.24
TPM3-211ENST00000368531 CAVIN3Q969G5 261 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 CCDC74AQ96AQ1 378 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 CCDC77Q9BR77 488 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 MCMBPQ9BTE3 642 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 LATS2Q9NRM7 1088 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 EVA1BQ9NVM1 165 aa13.58□□□□□ -0.24
TPM3-211ENST00000368531 PHGDHO43175 533 aaKnown RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 TNFSF14O43557 240 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 MTHFD1P11586 935 aaKnown RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 CKMT1AP12532 417 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 GLB1P16278 677 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 XRCC1P18887 633 aaPredicted RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 ALDH4A1P30038 563 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 SKIV2L2P42285 1042 aaKnown RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 MAPK9P45984 424 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 DUSP3P51452 185 aaPredicted RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 PLOD1Q02809 727 aaPredicted RBP13.57□□□□□ -0.24
TPM3-211ENST00000368531 PRKG2Q13237 762 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 CEP97Q8IW35 865 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 MYRIPQ8NFW9 859 aa13.57□□□□□ -0.24
TPM3-211ENST00000368531 OR2W6PQ8NHA6 318 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms