RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SEMA3AQ14563 771 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 SNAP47Q5SQN1 464 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 CES3Q6UWW8 571 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
CD48-202ENST00000368046 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 SDCCAG8Q86SQ7 713 aaPredicted RBP9.62□□□□□ -0.87
CD48-202ENST00000368046 PPIL6Q8IXY8 311 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 TFGQ92734 400 aaPredicted RBP9.62□□□□□ -0.87
CD48-202ENST00000368046 USP7Q93009 1102 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 ZDHHC12Q96GR4 267 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 CAPZA3Q96KX2 299 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 C9orf72Q96LT7 481 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 RUNDC3BQ96NL0 473 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 FERD3LQ96RJ6 166 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 TCF12Q99081 682 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 TMUB1Q9BVT8 246 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 CARD6Q9BX69 1037 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 ASPSCR1Q9BZE9 553 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 ZMYND15Q9H091 742 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 DDX47Q9H0S4 455 aaKnown RBP9.62□□□□□ -0.87
CD48-202ENST00000368046 CATSPERZQ9NTU4 200 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 OCIAD1Q9NX40 245 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 SYBUQ9NX95 663 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 ACSL6Q9UKU0 697 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 PCDHGA3Q9Y5H0 932 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 CFAP20Q9Y6A4 193 aaKnown RBP9.62□□□□□ -0.87
CD48-202ENST00000368046 RP1P56715 2156 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 USP24Q9UPU5 2620 aa9.62□□□□□ -0.87
CD48-202ENST00000368046 MAP1BP46821 2468 aaKnown RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 SCN8AQ9UQD0 1980 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ARHGEF17Q96PE2 2063 aaPredicted RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 FAM237BA0A1B0GVD1 139 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 SLC5A10A0PJK1 596 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 B4E171 279 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 GOLGA8MH3BSY2 632 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 CCDC188H7C350 402 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 PRMT5O14744 637 aaPredicted RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 PFDN6O15212 129 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 NDUFS3O75489 264 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 TMEM63AO94886 807 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ANKRD34CP0C6C1 535 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 PAMP19021 973 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 IVDP26440 423 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ITPKBP27987 946 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 TSPAN7P41732 249 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ARCN1P48444 511 aaKnown RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 ETF1P62495 437 aaKnown RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 MC2RQ01718 297 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 MRNIPQ6NTE8 343 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 C19orf48Q6RUI8 117 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 JAMLQ86YT9 394 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 MPP5Q8N3R9 675 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 PHC3Q8NDX5 983 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 GPR150Q8NGU9 434 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 KCNE4Q8WWG9 221 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ASZ1Q8WWH4 475 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 ELMO1Q92556 727 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 RSC1A1Q92681 617 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 NAF1Q96HR8 494 aaKnown RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 SIGLEC10Q96LC7 697 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 SERPINB12Q96P63 405 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 TGM7Q96PF1 710 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 TSSK1BQ9BXA7 367 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 MVB12BQ9H7P6 319 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 FBXO8Q9NRD0 319 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 HRASLS2Q9NWW9 162 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 SLC39A1Q9NY26 324 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 SAMD15Q9P1V8 674 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 MARCH4Q9P2E8 410 aaPredicted RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 KLHL3Q9UH77 587 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 SLC24A2Q9UI40 661 aa9.61□□□□□ -0.87
CD48-202ENST00000368046 COL27A1Q8IZC6 1860 aaPredicted RBP9.61□□□□□ -0.87
CD48-202ENST00000368046 ZZEF1O43149 2961 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 MYLKQ15746 1914 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 MN1Q10571 1320 aaPredicted RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 LAMA5O15230 3695 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 C9orf172C9J069 976 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 DNALI1O14645 258 aaPredicted RBP9.6□□□□□ -0.87
CD48-202ENST00000368046 KLK10O43240 276 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ARNTP27540 789 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 CD82P27701 267 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ACADLP28330 430 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 CASQ1P31415 396 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 CCR7P32248 378 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 MAGEA3P43357 314 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 ABCG1P45844 678 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 CAPZBP47756 277 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 GFERP55789 205 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 RAB15P59190 212 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 DR1Q01658 176 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 PTK6Q13882 451 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 BRD3Q15059 726 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
CD48-202ENST00000368046 COL28A1Q2UY09 1125 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms