RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 OR2T12Q8NG77 320 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 TMBIM1Q969X1 311 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 COG8Q96MW5 612 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 RDH14Q9HBH5 336 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 TLR9Q9NR96 1032 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 USE1Q9NZ43 259 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 KLHL42Q9P2K6 505 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 OPTCQ9UBM4 332 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 AFF4Q9UHB7 1163 aaKnown RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 NEUROG3Q9Y4Z2 214 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 ANGPTL3Q9Y5C1 460 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 PCDHB9Q9Y5E1 797 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 EBLN1P0CF75 366 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 ELNP15502 786 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 NFKBIAP25963 317 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 DGKQP52824 942 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 RAB15P59190 212 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 PYCR3Q53H96 274 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 HABP4Q5JVS0 413 aaKnown RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 CDKL4Q5MAI5 379 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 BROXQ5VW32 411 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 LINGO4Q6UY18 593 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 TAS1R1Q7RTX1 841 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 NECAB2Q7Z6G3 386 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 THAP5Q7Z6K1 395 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 ZDHHC13Q8IUH4 622 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 HJURPQ8NCD3 748 aaPredicted RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 ZNF548Q8NEK5 533 aaPredicted RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 PIH1D2Q8WWB5 315 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 GTF2H4Q92759 462 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 NRBF2Q96F24 287 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 MAGED4Q96JG8 741 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 RPL10LQ96L21 214 aaKnown RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 NTMT1Q9BV86 223 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 CD244Q9BZW8 370 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 DPY30Q9C005 99 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 CIPCQ9C0C6 399 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 PIF1Q9H611 641 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 HPS4Q9NQG7 708 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 GKN1Q9NS71 199 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 ELOVL2Q9NXB9 296 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 DNMT3BQ9UBC3 853 aaKnown RBP14.04□□□□□ -0.16
CD48-201ENST00000368045 CDC14AQ9UNH5 594 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 OR51B4Q9Y5P0 310 aa14.04□□□□□ -0.16
CD48-201ENST00000368045 SH3PXD2BA1X283 911 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 C16orf96A6NNT2 1141 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 H0Y626 953 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 K7EPI3 171 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 GAPDHSO14556 408 aaPredicted RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 TAPBPO15533 448 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 PFDN1O60925 122 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 PRAMEF1O95521 474 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MT-ND1P03886 318 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MBL2P11226 248 aaPredicted RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 IL1RNP18510 177 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MTHFRP42898 656 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 RANBP1P43487 201 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 GNPDA1P46926 289 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 CSNK1DP48730 415 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 HSPA7P48741 367 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 GATMP50440 423 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 PTPN5P54829 565 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 TMBIM6P55061 237 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 RPL38P63173 70 aaKnown RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 CTBSQ01459 385 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 CYP4F3Q08477 520 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MAPKAPK3Q16644 382 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 C18orf21Q32NC0 220 aaPredicted RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 GPR33Q49SQ1 333 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 OTUD3Q5T2D3 398 aaPredicted RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 TMEM214Q6NUQ4 689 aaKnown RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 FAM117BQ6P1L5 589 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 STK32CQ86UX6 486 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 FAM9CQ8IZT9 166 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 C8orf59Q8N0T1 100 aaPredicted RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 CLEC4FQ8N1N0 589 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 ZBTB2Q8N680 514 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 DCAF4L2Q8NA75 395 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 OR13F1Q8NGS4 319 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 FNDC8Q8TC99 324 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 EID2BQ96D98 161 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 MUS81Q96NY9 551 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 FEM1AQ9BSK4 669 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 ING2Q9H160 280 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 NSUN3Q9H649 340 aaKnown RBP14.03□□□□□ -0.16
CD48-201ENST00000368045 MAGIXQ9H6Y5 334 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 WWOXQ9NZC7 414 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
CD48-201ENST00000368045 CASP8AP2Q9UKL3 1982 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 ELOVL7A1L3X0 281 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 ADAM12O43184 909 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 DFNA5O60443 496 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 TBL1XO60907 577 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 ULK1O75385 1050 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 RSL1D1O76021 490 aaKnown RBP14.02□□□□□ -0.16
CD48-201ENST00000368045 EFEMP2O95967 443 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms