RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KRT86O43790 486 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GSTM1P09488 218 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 EBLN1P0CF75 366 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 NDUFS1P28331 727 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OAS2P29728 719 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FOXN2P32314 431 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GRIA1P42261 906 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 HSD11B2P80365 405 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GSTM4Q03013 218 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ACVR1Q04771 509 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CDH17Q12864 832 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 NFATC3Q12968 1075 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RPA4Q13156 261 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PLCL1Q15111 1095 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZRANB3Q5FWF4 1079 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PWWP2BQ6NUJ5 590 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PACS1Q6VY07 963 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OOSP2Q86WS3 158 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RASGRP3Q8IV61 690 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TAB3Q8N5C8 712 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GLIS1Q8NBF1 620 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SIDT2Q8NBJ9 832 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ACVR1CQ8NER5 493 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR52K1Q8NGK4 314 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 STARD8Q92502 1023 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ELMO2Q96JJ3 720 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PPM1MQ96MI6 270 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RANBP9Q96S59 729 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC25A18Q9H1K4 315 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PDE7BQ9NP56 450 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FAM8A1Q9UBU6 413 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GUCA1BQ9UMX6 200 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BTRCQ9Y297 605 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 HEBP2Q9Y5Z4 205 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MRPS18BQ9Y676 258 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PRSS21Q9Y6M0 314 aa13.31□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR51F1A6NGY5 319 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SUV39H1O43463 412 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 AP2A2O94973 939 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RECKO95980 971 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FDFT1P37268 417 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 POLE2P56282 527 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 GSDMDP57764 484 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ACY1Q03154 408 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TUBB3Q13509 450 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SEMA5AQ13591 1074 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ITIH4Q14624 930 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SKIDA1Q1XH10 827 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCDC38Q502W7 563 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DNTTIP2Q5QJE6 756 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SEL1L2Q5TEA6 688 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF517Q6ZMY9 492 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TAS2R42Q7RTR8 314 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PRUNE1Q86TP1 453 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR4E2Q8NGC2 313 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF501Q96CX3 271 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RNF31Q96EP0 1072 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SGSM3Q96HU1 749 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF778Q96MU6 729 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 NRTNQ99748 197 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 AKIRIN1Q9H9L7 192 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CASS4Q9NQ75 786 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FGF21Q9NSA1 209 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 POMT2Q9UKY4 750 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RARRES3Q9UL19 164 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PIKFYVEQ9Y2I7 2098 aa13.3□□□□□ -0.28
TNFRSF1A-202ENST00000366159 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCDC162PA2VCL2 907 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BTN3A3O00478 584 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ARHGAP6O43182 974 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MT-ND3P03897 115 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FURINP09958 794 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MSL3P1P0C860 447 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ETS1P14921 441 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 POLR2CP19387 275 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MSNP26038 577 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ACADLP28330 430 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DLSTP36957 453 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 NSG1P42857 185 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCR10P46092 362 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TUBB4BP68371 445 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MC1RQ01726 317 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KCNAB2Q13303 367 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TUBB2AQ13885 445 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BOP1Q14137 746 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SEPT6Q14141 434 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ATP1A1-AS1Q5TC04 95 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DRICH1Q6PGQ1 229 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FERD3LQ96RJ6 166 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TUBB2BQ9BVA1 445 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms