RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 KLQ9UEF7 1012 aa13.24□□□□□ -0.29
PPARGC1B-202ENST00000360453 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
PPARGC1B-202ENST00000360453 SYCE1LA8MT33 242 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 NT5C1B-RDH14C9J2C7 533 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZNF140P52738 457 aaPredicted RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 GP2P55259 537 aaKnown RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 CRY1Q16526 586 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 SLC16A12Q6ZSM3 486 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 SLCO6A1Q86UG4 719 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 GLMNQ92990 594 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 C1orf74Q96LT6 269 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 EGFL8Q99944 293 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 CINPQ9BW66 212 aaPredicted RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 VNN3Q9NY84 501 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 SLC25A37Q9NYZ2 338 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ERGIC3Q9Y282 383 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZFP37Q9Y6Q3 630 aaPredicted RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 MYO16Q9Y6X6 1858 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 KRBA1A5PL33 1030 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 MYO1GB0I1T2 1018 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 M0QZQ0 153 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 AGRPO00253 132 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 OR7A17O14581 309 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 LSM1O15116 133 aaKnown RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 SULT1C4O75897 302 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 PRLP01236 227 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ALPIP09923 528 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 IRF1P10914 325 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 UMPSP11172 480 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 GGT1P19440 569 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 EPHA2P29317 976 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TTKP33981 857 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 HALP42357 657 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ACVR1Q04771 509 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 DSG4Q86SJ6 1040 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ATP6V0D2Q8N8Y2 350 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 RPL3LQ92901 407 aaKnown RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 HPS4Q9NQG7 708 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 RASSF1Q9NS23 344 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 MAGEL2Q9UJ55 1249 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 H0Y626 953 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TRIM16O95361 564 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 CYP11A1P05108 521 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 NCS1P62166 190 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 RAPSNQ13702 412 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TYSND1Q2T9J0 566 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 LAIR1Q6GTX8 287 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 LRRC49Q8IUZ0 686 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZNF555Q8NEP9 628 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 RIBC2Q9H4K1 309 aa13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 AFF4Q9UHB7 1163 aaKnown RBP13.23□□□□□ -0.29
PPARGC1B-202ENST00000360453 WASH4PA8MWX3 477 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZNF682O95780 498 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 SERPINA1P01009 418 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 OGNP20774 298 aaKnown RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 HOXD9P28356 352 aaPredicted RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 TMBIM6P55061 237 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 FAM189BP81408 668 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 MAPRE1Q15691 268 aaKnown RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 MAPKAPK3Q16644 382 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 FAM110CQ1W6H9 321 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 PDCD4Q53EL6 469 aaKnown RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 LIX1Q8N485 282 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 RNF175Q8N4F7 328 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 GPR150Q8NGU9 434 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 LKAAEAR1Q8TD35 194 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 RAB2BQ8WUD1 216 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 FKBP10Q96AY3 582 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 SUSD3Q96L08 255 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 TRIB3Q96RU7 358 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 NACA2Q9H009 215 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 GKN1Q9NS71 199 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 SMPD4Q9NXE4 827 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 HACD3Q9P035 362 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 H0YAE9 185 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 STX7O15400 261 aaKnown RBP13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 VPS4BO75351 444 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 SH3BGRLO75368 114 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 ZNF12P17014 697 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 GKP32189 559 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 HPCAL1P37235 193 aa13.22□□□□□ -0.29
PPARGC1B-202ENST00000360453 NEK2P51955 445 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms