RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CENPIQ92674 756 aaPredicted RBP7.58□□□□□ -1.2
CCR9-201ENST00000355983 CRELD1Q96HD1 420 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 AHCYL2Q96HN2 611 aaKnown RBP7.58□□□□□ -1.2
CCR9-201ENST00000355983 SRRQ9GZT4 340 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 MIR1-1HGQ9H1L0 117 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 CCSER2Q9H7U1 834 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 TNFRSF12AQ9NP84 129 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 IL1RAPQ9NPH3 570 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 DDX4Q9NQI0 724 aaKnown RBP7.58□□□□□ -1.2
CCR9-201ENST00000355983 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 ZNF277Q9NRM2 450 aaPredicted RBP7.58□□□□□ -1.2
CCR9-201ENST00000355983 ZIM2Q9NZV7 527 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 PHF11Q9UIL8 331 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 NDRG4Q9ULP0 352 aaKnown RBP7.58□□□□□ -1.2
CCR9-201ENST00000355983 KLHL20Q9Y2M5 609 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 PCDHB5Q9Y5E4 795 aa7.58□□□□□ -1.2
CCR9-201ENST00000355983 COL11A2P13942 1736 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 LINC00854A0A1B0GVQ3 168 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ASPDHA6ND91 283 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 A8MX80 341 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ACKR2O00590 384 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ANKRD28O15084 1053 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 NCAM2O15394 837 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 PSMD3O43242 534 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 RFPL3O75679 317 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 FADS2O95864 444 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 NCF1P14598 390 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 CD9P21926 228 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ALAS2P22557 587 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 GADD45AP24522 165 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 PSMB4P28070 264 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ZFP36L2P47974 494 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 IFRD2Q12894 506 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 MAB21L1Q13394 359 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 DGCR6Q14129 220 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 GBX1Q14549 363 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 COL28A1Q2UY09 1125 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 TKFCQ3LXA3 575 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 TYW3Q6IPR3 259 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 SHQ1Q6PI26 577 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ACVR1CQ8NER5 493 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ZSWIM3Q96MP5 696 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 CSPG4P5Q96PW8 444 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 TRNT1Q96Q11 434 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 TMEM134Q9H6X4 195 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 IL1RL2Q9HB29 575 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 GBA2Q9HCG7 927 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 A0A0U1RQS6 177 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 H3BUI4 141 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 I3L521 148 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 HS6ST1O60243 411 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 HUS1O60921 280 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MICAL2O94851 1124 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 SCELO95171 688 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 CELF2O95319 508 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 RETP07949 1114 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 FSHRP23945 695 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 TNFSF8P32971 234 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 GLRBP48167 497 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 OR4D2P58180 307 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 GRK1Q15835 563 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 UGCGQ16739 394 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 DALRD3Q5D0E6 543 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 RABL3Q5HYI8 236 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MFSD14BQ5SR56 506 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 SH3PXD2AQ5TCZ1 1133 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 KANK2Q63ZY3 851 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MAP1SQ66K74 1059 aaPredicted RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 TEX261Q6UWH6 196 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ZDHHC17Q8IUH5 632 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 OR8H2Q8N162 312 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 C9orf62Q8N4C0 152 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 DTWD1Q8N5C7 304 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 DUSP18Q8NEJ0 188 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 HEXDCQ8WVB3 486 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MYDGFQ969H8 173 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MARC2Q969Z3 335 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 PYCR2Q96C36 320 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ATXN7L3BQ96GX2 97 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 ACOX2Q99424 681 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MSTO1Q9BUK6 570 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 HDHD5Q9BXW7 423 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 CEP41Q9BYV8 373 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 HAPLN2Q9GZV7 340 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 AIG1Q9NVV5 245 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MED9Q9NWA0 146 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
CCR9-201ENST00000355983 COL20A1Q9P218 1284 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 STUB1Q9UNE7 303 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 PRELID3BQ9Y3B1 194 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 U3KQ87 197 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 V9GYH0 126 aa7.57□□□□□ -1.2
CCR9-201ENST00000355983 FAM234BA2RU67 622 aa7.56□□□□□ -1.2
CCR9-201ENST00000355983 NT5C1B-RDH14C9J2C7 533 aa7.56□□□□□ -1.2
CCR9-201ENST00000355983 FAM20BO75063 409 aa7.56□□□□□ -1.2
CCR9-201ENST00000355983 PTP4A3O75365 173 aa7.56□□□□□ -1.2
CCR9-201ENST00000355983 STBD1O95210 358 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms