RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ZNF135P52742 658 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 RELAQ04206 551 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 TAZQ16635 292 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SYCE2Q6PIF2 218 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 LRRC17Q8N6Y2 441 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 IGSF8Q969P0 613 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 RTP4Q96DX8 246 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 MAGEE1Q9HCI5 957 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 POLR3HQ9Y535 204 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 UBR3Q6ZT12 1888 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 NOS1APO75052 506 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SLC7A1P30825 629 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 GKP32189 559 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PTGS2P35354 604 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 VBP1P61758 197 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SP3Q02447 781 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 ZNF467Q7Z7K2 595 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SNX29P2Q8IUI4 249 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 RDH11Q8TC12 318 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SLC47A1Q96FL8 570 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 NSMCE3Q96MG7 304 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SORT1Q99523 831 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 ARL15Q9NXU5 204 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■■ 87.3
SREBF1-202ENST00000355815 hCG_2039718K7EN88 272 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SEPT4O43236 478 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 OXSR1O95747 527 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 CSF2P04141 144 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PORP16435 677 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 CRATP43155 626 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 TMEM236Q5W0B7 351 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 OR10A6Q8NH74 314 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 SLC2A13Q96QE2 648 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 PDP1Q9P0J1 537 aaPredicted RBP13.87□□□□□ -0.19
SREBF1-202ENST00000355815 LYVE1Q9Y5Y7 322 aa13.87□□□□□ -0.19
SREBF1-202ENST00000355815 ZSCAN5BA6NJL1 495 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 FAM220BPB1ANY3 271 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 H7C4K7 107 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 SNNO75324 88 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 AP2A2O94973 939 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 CD36P16671 472 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 HSPA7P48741 367 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 PTPN5P54829 565 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 CLCQ05315 142 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 BTG3Q14201 252 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 HM13Q8TCT9 377 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 SELENOMQ8WWX9 145 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MED8Q96G25 268 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 TRNT1Q96Q11 434 aaKnown RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 OR52E6Q96RD3 313 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ING3Q9NXR8 418 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 TMED5Q9Y3A6 229 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 I3L521 148 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 CLPXO76031 633 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 KCNA5P22460 613 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ELK4P28324 431 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 SCNN1AP37088 669 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 COL9A2Q14055 689 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MZT2BQ6NZ67 158 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 AKTIPQ9H8T0 292 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 HMX1Q9NP08 348 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 C12orf4Q9NQ89 552 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 RREB1Q92766 1687 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 FUOMA2VDF0 154 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 OR6C70A6NIJ9 312 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MAFKO60675 156 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ALPIP09923 528 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 GLDCP23378 1020 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 GDF5P43026 501 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 PGFP49763 221 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 AGTR2P50052 363 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 MEP1AQ16819 746 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ANKRD49Q8WVL7 239 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 TRIB2Q92519 343 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-202ENST00000355815 ERGIC3Q9Y282 383 aa13.86□□□□□ -0.19
SREBF1-202ENST00000355815 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 EFCAB9A8MZ26 197 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 BMP10O95393 424 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 LRG1P02750 347 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 FGF1P05230 155 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 URODP06132 367 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 ZNF7P17097 686 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-202ENST00000355815 CTSKP43235 329 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 PTPRRQ15256 657 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 MOGQ16653 247 aa13.85□□□□□ -0.19
SREBF1-202ENST00000355815 KIAA0930Q6ICG6 404 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms